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嗜碱芽孢杆菌内切-β-1,4-葡聚糖酶B(CelB)家族46碳水化合物结合模块(CBM46)的过量表达、纯化、结晶及初步X射线表征

Overproduction, purification, crystallization and preliminary X-ray characterization of the family 46 carbohydrate-binding module (CBM46) of endo-β-1,4-glucanase B (CelB) from Bacillus halodurans.

作者信息

Venditto Immacolata, Santos Helena, Ferreira Luís M A, Sakka Kazuo, Fontes Carlos M G A, Najmudin Shabir

机构信息

CIISA-Faculdade de Medicina Veterinaria, Universidade de Lisboa, Avenida da Universidade Técnica, 1300-477 Lisbon, Portugal.

Graduate School of Bioresources, Mie University, Tsu 514-8507, Japan.

出版信息

Acta Crystallogr F Struct Biol Commun. 2014 Jun;70(Pt 6):754-7. doi: 10.1107/S2053230X14008395. Epub 2014 May 10.

Abstract

Plant cell-wall polysaccharides offer an abundant energy source utilized by many microorganisms, thus playing a central role in carbon recycling. Aerobic microorganisms secrete carbohydrate-active enzymes (CAZymes) that catabolize this composite structure, comprising cellulose, hemicellulose and lignin, into simple compounds such as glucose. Carbohydrate-binding modules (CBMs) enhance the efficacy of associated CAZYmes. They are organized into families based on primary-sequence homology. CBM family 46 contains more than 40 different members, but has yet to be fully characterized. Here, a recombinant derivative of the C-terminal family 46 CBM module (BhCBM46) of Bacillus halodurans endo-β-1,4-glucanase B (CelB) was overexpressed in Escherichia coli and purified by immobilized metal-ion affinity chromatography. Preliminary structural characterization was carried out on BhCBM46 crystallized in different conditions. The crystals of BhCBM46 belonged to the tetragonal space group I4₁22. Data were collected for the native form and a selenomethionine derivative to 2.46 and 2.3 Å resolution, respectively. The BhCBM46 structure was determined by a single-wavelength anomalous dispersion experiment using AutoSol from the PHENIX suite.

摘要

植物细胞壁多糖提供了一种丰富的能源,许多微生物都可利用,因此在碳循环中发挥着核心作用。需氧微生物分泌碳水化合物活性酶(CAZymes),将这种由纤维素、半纤维素和木质素组成的复合结构分解为葡萄糖等简单化合物。碳水化合物结合模块(CBMs)可提高相关CAZymes的功效。它们根据一级序列同源性被分为不同家族。CBM家族46包含40多个不同成员,但尚未得到充分表征。在此,嗜碱芽孢杆菌内切-β-1,4-葡聚糖酶B(CelB)的C端家族46 CBM模块(BhCBM46)的重组衍生物在大肠杆菌中过表达,并通过固定化金属离子亲和色谱法进行纯化。对在不同条件下结晶的BhCBM46进行了初步结构表征。BhCBM46的晶体属于四方晶系空间群I4₁22。分别收集了天然形式和硒代甲硫氨酸衍生物的数据,分辨率分别为2.46 Å和2.3 Å。BhCBM46的结构通过使用PHENIX套件中的AutoSol进行的单波长反常色散实验确定。

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