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微生物天然产物在抗生素发现中重新显现的作用。

The re-emerging role of microbial natural products in antibiotic discovery.

作者信息

Genilloud Olga

机构信息

Fundación MEDINA, Avda Conocimiento 3, Parque Tecnológico Ciencias de la Salud, 18016, Granada, Spain,

出版信息

Antonie Van Leeuwenhoek. 2014 Jul;106(1):173-88. doi: 10.1007/s10482-014-0204-6. Epub 2014 Jun 13.

Abstract

New classes of antibacterial compounds are urgently needed to respond to the high frequency of occurrence of resistances to all major classes of known antibiotics. Microbial natural products have been for decades one of the most successful sources of drugs to treat infectious diseases but today, the emerging unmet clinical need poses completely new challenges to the discovery of novel candidates with the desired properties to be developed as antibiotics. While natural products discovery programs have been gradually abandoned by the big pharma, smaller biotechnology companies and research organizations are taking over the lead in the discovery of novel antibacterials. Recent years have seen new approaches and technologies being developed and integrated in a multidisciplinary effort to further exploit microbial resources and their biosynthetic potential as an untapped source of novel molecules. New strategies to isolate novel species thought to be uncultivable, and synthetic biology approaches ranging from genome mining of microbial strains for cryptic biosynthetic pathways to their heterologous expression have been emerging in combination with high throughput sequencing platforms, integrated bioinformatic analysis, and on-site analytical detection and dereplication tools for novel compounds. These different innovative approaches are defining a completely new framework that is setting the bases for the future discovery of novel chemical scaffolds that should foster a renewed interest in the identification of novel classes of natural product antibiotics from the microbial world.

摘要

迫切需要新型抗菌化合物来应对对所有主要已知抗生素类别耐药性的高发生率。几十年来,微生物天然产物一直是治疗传染病最成功的药物来源之一,但如今,新出现的未满足临床需求给发现具有所需特性的新型候选抗生素带来了全新挑战。虽然大型制药公司已逐渐放弃天然产物发现项目,但规模较小的生物技术公司和研究机构正在引领新型抗菌药物的发现。近年来,人们开发并整合了新方法和技术,通过多学科努力进一步挖掘微生物资源及其生物合成潜力,将其作为新型分子的未开发来源。新策略包括分离被认为不可培养的新物种,以及从微生物菌株的基因组挖掘隐秘生物合成途径到其异源表达的合成生物学方法,这些方法与高通量测序平台、综合生物信息学分析以及新型化合物的现场分析检测和去重复工具相结合。这些不同的创新方法正在定义一个全新的框架,为未来发现新型化学支架奠定基础,有望重新激发人们从微生物世界中鉴定新型天然产物抗生素类别的兴趣。

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