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The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system.眼镜王蛇基因组揭示了蛇毒系统中的动态基因进化和适应。
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2
Linking the transcriptome and proteome to characterize the venom of the eastern diamondback rattlesnake (Crotalus adamanteus).将转录组和蛋白质组联系起来以表征东部菱斑响尾蛇(Crotalus adamanteus)的毒液。
J Proteomics. 2014 Jan 16;96:145-58. doi: 10.1016/j.jprot.2013.11.001. Epub 2013 Nov 12.
3
Quantitative high-throughput profiling of snake venom gland transcriptomes and proteomes (Ovophis okinavensis and Protobothrops flavoviridis).蛇毒腺转录组和蛋白质组的定量高通量分析(冲绳烙铁头蛇和日本蝮蛇)
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Phylogeny-based comparative analysis of venom proteome variation in a clade of rattlesnakes (Sistrurus sp.).基于系统发育的响尾蛇(Sistrurus sp.)毒蛋白组变异的比较分析。
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5
Integrated "omics" profiling indicates that miRNAs are modulators of the ontogenetic venom composition shift in the Central American rattlesnake, Crotalus simus simus.综合“组学”分析表明,miRNAs 是中美洲响尾蛇 Crotalus simus simus 个体发育毒液成分转变的调控因子。
BMC Genomics. 2013 Apr 10;14:234. doi: 10.1186/1471-2164-14-234.
6
Complex cocktails: the evolutionary novelty of venoms.复杂的鸡尾酒:毒液的进化新颖性。
Trends Ecol Evol. 2013 Apr;28(4):219-29. doi: 10.1016/j.tree.2012.10.020. Epub 2012 Dec 5.
7
Dynamic evolution of venom proteins in squamate reptiles.爬行动物毒液蛋白的动态进化。
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8
Recombinant expression of mutants of the Frankenstein disintegrin, RTS-ocellatusin. Evidence for the independent origin of RGD and KTS/RTS disintegrins.重组表达弗兰肯斯坦 disintegrin 的突变体,RTS-ocellatusin。RGD 和 KTS/RTS disintegrins 独立起源的证据。
Toxicon. 2012 Sep 15;60(4):665-75. doi: 10.1016/j.toxicon.2012.05.010. Epub 2012 Jun 4.
9
MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space.MrBayes 3.2:在大型模型空间中进行高效的贝叶斯系统发育推断和模型选择。
Syst Biol. 2012 May;61(3):539-42. doi: 10.1093/sysbio/sys029. Epub 2012 Feb 22.
10
Extensive and continuous duplication facilitates rapid evolution and diversification of gene families.广泛而持续的复制促进了基因家族的快速进化和多样化。
Mol Biol Evol. 2012 Aug;29(8):2019-29. doi: 10.1093/molbev/mss068. Epub 2012 Feb 15.

蛇毒液成分中的医学重要差异是由不同的后基因组机制决定的。

Medically important differences in snake venom composition are dictated by distinct postgenomic mechanisms.

机构信息

Alistair Reid Venom Research Unit andMolecular Ecology and Evolution Group, School of Biological Sciences, Bangor University, Bangor LL57 2UW, United Kingdom; and

Bioinformatics Unit, Liverpool School of Tropical Medicine, Liverpool L3 5QA, United Kingdom;

出版信息

Proc Natl Acad Sci U S A. 2014 Jun 24;111(25):9205-10. doi: 10.1073/pnas.1405484111. Epub 2014 Jun 9.

DOI:10.1073/pnas.1405484111
PMID:24927555
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4078820/
Abstract

Variation in venom composition is a ubiquitous phenomenon in snakes and occurs both interspecifically and intraspecifically. Venom variation can have severe outcomes for snakebite victims by rendering the specific antibodies found in antivenoms ineffective against heterologous toxins found in different venoms. The rapid evolutionary expansion of different toxin-encoding gene families in different snake lineages is widely perceived as the main cause of venom variation. However, this view is simplistic and disregards the understudied influence that processes acting on gene transcription and translation may have on the production of the venom proteome. Here, we assess the venom composition of six related viperid snakes and compare interspecific changes in the number of toxin genes, their transcription in the venom gland, and their translation into proteins secreted in venom. Our results reveal that multiple levels of regulation are responsible for generating variation in venom composition between related snake species. We demonstrate that differential levels of toxin transcription, translation, and their posttranslational modification have a substantial impact upon the resulting venom protein mixture. Notably, these processes act to varying extents on different toxin paralogs found in different snakes and are therefore likely to be as important as ancestral gene duplication events for generating compositionally distinct venom proteomes. Our results suggest that these processes may also contribute to altering the toxicity of snake venoms, and we demonstrate how this variability can undermine the treatment of a neglected tropical disease, snakebite.

摘要

毒液成分的变异在蛇类中是一种普遍现象,既存在于种间,也存在于种内。毒液变异会使抗蛇毒血清中发现的特定抗体对不同毒液中的异源毒素无效,从而给蛇伤受害者带来严重后果。不同蛇类谱系中不同毒素编码基因家族的快速进化扩张被广泛认为是毒液变异的主要原因。然而,这种观点过于简单化,忽视了作用于基因转录和翻译的过程可能对毒液蛋白质组的产生产生的研究不足的影响。在这里,我们评估了六种相关蝰蛇的毒液成分,并比较了种间毒素基因数量、毒液腺中转录以及在毒液中分泌的蛋白质翻译的变化。我们的结果表明,多个调节水平负责产生相关蛇种之间毒液成分的变异。我们证明,毒素转录、翻译和翻译后的修饰水平的差异对产生的毒液蛋白混合物有很大影响。值得注意的是,这些过程在不同的蛇中对不同的毒素旁系同源物产生不同的作用程度,因此对于产生组成上不同的毒液蛋白质组可能与祖先基因复制事件一样重要。我们的结果表明,这些过程也可能导致蛇毒毒性的改变,我们展示了这种可变性如何破坏对一种被忽视的热带病,蛇咬伤的治疗。