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源自野生二粒小麦(Triticum dicoccoides)的抗白粉病基因MlIW172的精细物理图谱和遗传图谱构建

Fine physical and genetic mapping of powdery mildew resistance gene MlIW172 originating from wild emmer (Triticum dicoccoides).

作者信息

Ouyang Shuhong, Zhang Dong, Han Jun, Zhao Xiaojie, Cui Yu, Song Wei, Huo Naxin, Liang Yong, Xie Jingzhong, Wang Zhenzhong, Wu Qiuhong, Chen Yong-Xing, Lu Ping, Zhang De-Yun, Wang Lili, Sun Hua, Yang Tsomin, Keeble-Gagnere Gabriel, Appels Rudi, Doležel Jaroslav, Ling Hong-Qing, Luo Mingcheng, Gu Yongqiang, Sun Qixin, Liu Zhiyong

机构信息

State Key Laboratory for Agrobiotechnology/Beijing Key Laboratory of Crop Genetic Improvement/Key Laboratory of Crop Heterosis Research & Utilization, Ministry of Education, China Agricultural University, Beijing, China.

State Key Laboratory for Agrobiotechnology/Beijing Key Laboratory of Crop Genetic Improvement/Key Laboratory of Crop Heterosis Research & Utilization, Ministry of Education, China Agricultural University, Beijing, China; Agriculture University of Beijing, Beijing, China.

出版信息

PLoS One. 2014 Jun 23;9(6):e100160. doi: 10.1371/journal.pone.0100160. eCollection 2014.

DOI:10.1371/journal.pone.0100160
PMID:24955773
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4067302/
Abstract

Powdery mildew, caused by Blumeria graminis f. sp. tritici, is one of the most important wheat diseases in the world. In this study, a single dominant powdery mildew resistance gene MlIW172 was identified in the IW172 wild emmer accession and mapped to the distal region of chromosome arm 7AL (bin7AL-16-0.86-0.90) via molecular marker analysis. MlIW172 was closely linked with the RFLP probe Xpsr680-derived STS marker Xmag2185 and the EST markers BE405531 and BE637476. This suggested that MlIW172 might be allelic to the Pm1 locus or a new locus closely linked to Pm1. By screening genomic BAC library of durum wheat cv. Langdon and 7AL-specific BAC library of hexaploid wheat cv. Chinese Spring, and after analyzing genome scaffolds of Triticum urartu containing the marker sequences, additional markers were developed to construct a fine genetic linkage map on the MlIW172 locus region and to delineate the resistance gene within a 0.48 cM interval. Comparative genetics analyses using ESTs and RFLP probe sequences flanking the MlIW172 region against other grass species revealed a general co-linearity in this region with the orthologous genomic regions of rice chromosome 6, Brachypodium chromosome 1, and sorghum chromosome 10. However, orthologous resistance gene-like RGA sequences were only present in wheat and Brachypodium. The BAC contigs and sequence scaffolds that we have developed provide a framework for the physical mapping and map-based cloning of MlIW172.

摘要

由小麦白粉菌引起的白粉病是世界上最重要的小麦病害之一。在本研究中,在IW172野生二粒小麦材料中鉴定出一个单一显性抗白粉病基因MlIW172,并通过分子标记分析将其定位到染色体臂7AL的远端区域(bin7AL - 16 - 0.86 - 0.90)。MlIW172与RFLP探针Xpsr680衍生的STS标记Xmag2185以及EST标记BE405531和BE637476紧密连锁。这表明MlIW172可能与Pm1位点等位,或者是一个与Pm1紧密连锁的新位点。通过筛选硬粒小麦品种Langdon的基因组BAC文库和六倍体小麦品种中国春的7AL特异性BAC文库,并分析包含标记序列的乌拉尔图小麦基因组支架,开发了额外的标记,以构建MlIW172位点区域的精细遗传连锁图谱,并将抗性基因定位在0.48 cM的区间内。利用MlIW172区域侧翼的EST和RFLP探针序列与其他禾本科物种进行比较遗传学分析,结果显示该区域与水稻第6染色体、短柄草第1染色体和高粱第10染色体的直系同源基因组区域具有普遍的共线性。然而,直系同源抗性基因类似RGA序列仅存在于小麦和短柄草中。我们构建的BAC重叠群和序列支架为MlIW172的物理定位和图位克隆提供了框架。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/49d9/4067302/89fae9e2afe9/pone.0100160.g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/49d9/4067302/36d264ae412f/pone.0100160.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/49d9/4067302/37a7c3444e99/pone.0100160.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/49d9/4067302/b22facf6c199/pone.0100160.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/49d9/4067302/89fae9e2afe9/pone.0100160.g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/49d9/4067302/36d264ae412f/pone.0100160.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/49d9/4067302/37a7c3444e99/pone.0100160.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/49d9/4067302/b22facf6c199/pone.0100160.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/49d9/4067302/89fae9e2afe9/pone.0100160.g004.jpg

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