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一种捕蝇草机制可实现CPEB蛋白对RNA的序列特异性识别。

A fly trap mechanism provides sequence-specific RNA recognition by CPEB proteins.

作者信息

Afroz Tariq, Skrisovska Lenka, Belloc Eulàlia, Guillén-Boixet Jordina, Méndez Raúl, Allain Frédéric H-T

机构信息

Institute of Molecular Biology and Biophysics, Eidgenössische Technische Hochschule (ETH) Zurich, CH-8093 Zürich, Switzerland;

Institute for Research in Biomedicine, 08028 Barcelona, Spain;

出版信息

Genes Dev. 2014 Jul 1;28(13):1498-514. doi: 10.1101/gad.241133.114.

DOI:10.1101/gad.241133.114
PMID:24990967
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4083092/
Abstract

Cytoplasmic changes in polyA tail length is a key mechanism of translational control and is implicated in germline development, synaptic plasticity, cellular proliferation, senescence, and cancer progression. The presence of a U-rich cytoplasmic polyadenylation element (CPE) in the 3' untranslated regions (UTRs) of the responding mRNAs gives them the selectivity to be regulated by the CPE-binding (CPEB) family of proteins, which recognizes RNA via the tandem RNA recognition motifs (RRMs). Here we report the solution structures of the tandem RRMs of two human paralogs (CPEB1 and CPEB4) in their free and RNA-bound states. The structures reveal an unprecedented arrangement of RRMs in the free state that undergo an original closure motion upon RNA binding that ensures high fidelity. Structural and functional characterization of the ZZ domain (zinc-binding domain) of CPEB1 suggests a role in both protein-protein and protein-RNA interactions. Together with functional studies, the structures reveal how RNA binding by CPEB proteins leads to an optimal positioning of the N-terminal and ZZ domains at the 3' UTR, which favors the nucleation of the functional ribonucleoprotein complexes for translation regulation.

摘要

多聚腺苷酸尾长度的细胞质变化是翻译控制的关键机制,与生殖细胞发育、突触可塑性、细胞增殖、衰老和癌症进展有关。响应性mRNA的3'非翻译区(UTR)中富含U的细胞质聚腺苷酸化元件(CPE)的存在,赋予它们被CPE结合(CPEB)蛋白家族调控的选择性,该蛋白家族通过串联RNA识别基序(RRMs)识别RNA。在这里,我们报告了两个人类旁系同源物(CPEB1和CPEB4)的串联RRMs在游离状态和RNA结合状态下的溶液结构。这些结构揭示了游离状态下RRMs前所未有的排列方式,在RNA结合时会发生原始的闭合运动,以确保高保真度。CPEB1的ZZ结构域(锌结合结构域)的结构和功能表征表明其在蛋白质-蛋白质和蛋白质-RNA相互作用中均起作用。结合功能研究,这些结构揭示了CPEB蛋白与RNA的结合如何导致N末端和ZZ结构域在3'UTR处的最佳定位,这有利于功能性核糖核蛋白复合物的成核以进行翻译调控。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c6f7/4083092/a6913d06177a/1498fig6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c6f7/4083092/ec86cc756821/1498fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c6f7/4083092/46d38f8029c3/1498fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c6f7/4083092/27dda5afa7d3/1498fig3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c6f7/4083092/1dcc85961cce/1498fig4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c6f7/4083092/aa3246972791/1498fig5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c6f7/4083092/a6913d06177a/1498fig6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c6f7/4083092/ec86cc756821/1498fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c6f7/4083092/46d38f8029c3/1498fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c6f7/4083092/27dda5afa7d3/1498fig3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c6f7/4083092/1dcc85961cce/1498fig4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c6f7/4083092/aa3246972791/1498fig5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c6f7/4083092/a6913d06177a/1498fig6.jpg

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6
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