Barbosa Lima Amanda, Cannavan Fabiana Souza, Navarrete Acacio Aparecido, Teixeira Wenceslau Geraldes, Kuramae Eiko Eurya, Tsai Siu Mui
Laboratory of Cellular and Molecular Biology, Center for Nuclear Energy in Agriculture, University of São Paulo, Piracicaba, Brazil,
Microb Ecol. 2015 May;69(4):855-66. doi: 10.1007/s00248-014-0472-8. Epub 2014 Aug 8.
Amazonian Dark Earths (ADE) or Terra Preta de Índio formed in the past by pre-Columbian populations are highly sustained fertile soils supported by microbial communities that differ from those extant in adjacent soils. These soils are found in the Amazon region and are considered as a model soil when compared to the surrounding and background soils. The aim of this study was to assess the effects of ADE and its surrounding soil on the rhizosphere bacterial communities of two leguminous plant species that frequently occur in the Amazon region in forest sites (Mimosa debilis) and open areas (Senna alata). Bacterial community structure was evaluated using terminal restriction fragment length polymorphism (T-RFLP) and bacterial community composition by V4 16S rRNA gene region pyrosequencing. T-RFLP analysis showed effect of soil types and plant species on rhizosphere bacterial community structure. Differential abundance of bacterial phyla, such as Acidobacteria, Actinobacteria, Verrucomicrobia, and Firmicutes, revealed that soil type contributes to shape the bacterial communities. Furthermore, bacterial phyla such as Firmicutes and Nitrospira were mostly influenced by plant species. Plant roots influenced several soil chemical properties, especially when plants were grown in ADE. These results showed that differences observed in rhizosphere bacterial community structure and composition can be influenced by plant species and soil fertility due to variation in soil attributes.
亚马逊黑土(ADE)或印第安人黑土是前哥伦布时期的人口在过去形成的,是由微生物群落支撑的高度可持续的肥沃土壤,这些微生物群落与相邻土壤中现存的微生物群落不同。这些土壤存在于亚马逊地区,与周围和背景土壤相比,被视为一种典型土壤。本研究的目的是评估ADE及其周围土壤对亚马逊地区森林地带(含羞草)和开阔地带(番泻叶)常见的两种豆科植物根际细菌群落的影响。使用末端限制性片段长度多态性(T-RFLP)评估细菌群落结构,并通过V4 16S rRNA基因区域焦磷酸测序评估细菌群落组成。T-RFLP分析表明土壤类型和植物种类对根际细菌群落结构有影响。不同细菌门(如酸杆菌门、放线菌门、疣微菌门和厚壁菌门)的丰度差异表明土壤类型有助于塑造细菌群落。此外,厚壁菌门和硝化螺旋菌门等细菌门主要受植物种类的影响。植物根系影响了几种土壤化学性质,尤其是当植物生长在ADE中时。这些结果表明,由于土壤属性的差异,根际细菌群落结构和组成的差异可能受到植物种类和土壤肥力的影响。