Yuan Yongbo, Bi Changhao, Nicolaou Sergios A, Zingaro Kyle A, Ralston Matthew, Papoutsakis Eleftherios T
Department of Chemical Engineering & Delaware Biotechnology Institute, University of Delaware, 15 Innovation Way, Newark, DE, 19711, USA.
Appl Microbiol Biotechnol. 2014 Oct;98(19):8399-411. doi: 10.1007/s00253-014-6004-0. Epub 2014 Aug 31.
A major challenge in producing chemicals and biofuels is to increase the tolerance of the host organism to toxic products or byproducts. An Escherichia coli strain with superior ethanol and more generally alcohol tolerance was identified by screening a library constructed by randomly integrating Lactobacillus plantarum genomic DNA fragments into the E. coli chromosome via Cre-lox recombination. Sequencing identified the inserted DNA fragment as the murA2 gene and its upstream intergenic 973-bp sequence, both coded on the negative genomic DNA strand. Overexpression of this murA2 gene and its upstream 973-bp sequence significantly enhanced ethanol tolerance in both E. coli EC100 and wild type E. coli MG1655 strains by 4.1-fold and 2.0-fold compared to control strains, respectively. Tolerance to n-butanol and i-butanol in E. coli MG1655 was increased by 1.85-fold and 1.91-fold, respectively. We show that the intergenic 973-bp sequence contains a native promoter for the murA2 gene along with a long 5' UTR (286 nt) on the negative strand, while a noncoding, small RNA, named MurA2S, is expressed off the positive strand. MurA2S is expressed in E. coli and may interact with murA2, but it does not affect murA2's ability to enhance alcohol tolerance in E. coli. Overexpression of murA2 with its upstream region in the ethanologenic E. coli KO11 strain significantly improved ethanol production in cultures that simulate the industrial Melle-Boinot fermentation process.
生产化学品和生物燃料的一个主要挑战是提高宿主生物体对有毒产物或副产物的耐受性。通过筛选一个文库,鉴定出了一株对乙醇具有更高耐受性且更普遍地对酒精具有耐受性的大肠杆菌菌株。该文库是通过Cre-lox重组将植物乳杆菌基因组DNA片段随机整合到大肠杆菌染色体中构建而成的。测序确定插入的DNA片段为murA2基因及其上游973 bp的基因间序列,二者均编码于负链基因组DNA上。与对照菌株相比,该murA2基因及其上游973 bp序列的过表达分别使大肠杆菌EC100和野生型大肠杆菌MG1655菌株的乙醇耐受性显著提高了4.1倍和2.0倍。大肠杆菌MG1655对正丁醇和异丁醇的耐受性分别提高了1.85倍和1.91倍。我们发现,973 bp的基因间序列包含murA2基因的一个天然启动子以及负链上一个长的5'非翻译区(286 nt),而一个名为MurA2S的非编码小RNA从正链上表达。MurA2S在大肠杆菌中表达,可能与murA2相互作用,但它不影响murA2增强大肠杆菌酒精耐受性的能力。在产乙醇的大肠杆菌KO11菌株中过表达murA2及其上游区域,在模拟工业Melle-Boinot发酵过程的培养物中显著提高了乙醇产量。