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利用电子隧道电流检测单个肽中的翻译后修饰。

Detection of post-translational modifications in single peptides using electron tunnelling currents.

机构信息

The Institute of Scientific and Industrial Research, Osaka University, 8-1 Mihogaoka, Ibaraki, Osaka 567-0047, Japan.

出版信息

Nat Nanotechnol. 2014 Oct;9(10):835-40. doi: 10.1038/nnano.2014.193. Epub 2014 Sep 14.

DOI:10.1038/nnano.2014.193
PMID:25218325
Abstract

Post-translational modifications alter the properties of proteins through the cleavage of peptide bonds or the addition of a modifying group to one or more amino acids. These modifications allow proteins to perform their primary biological functions, but single-protein studies of post-translational modifications have been hindered by a lack of suitable analysis methods. Here, we show that single amino acids can be identified using electron tunnelling currents measured as the individual molecules pass through a nanoscale gap between electrodes. We identify 12 different amino acids and the post-translational modification phosphotyrosine, which is involved in the process that switches enzymes on and off. Furthermore, we show that the conductance measurements can be used to partially sequence peptides of an epidermal growth factor receptor substrate, and can discriminate a peptide from its phosphorylated variant.

摘要

翻译后修饰通过切割肽键或向一个或多个氨基酸添加修饰基团来改变蛋白质的性质。这些修饰使蛋白质能够执行其主要的生物学功能,但由于缺乏合适的分析方法,对翻译后修饰的单一蛋白质研究受到了阻碍。在这里,我们表明,单个氨基酸可以通过测量单个分子通过电极之间的纳米级间隙时的电子隧道电流来识别。我们鉴定出 12 种不同的氨基酸和翻译后修饰磷酸酪氨酸,它参与了酶的开启和关闭过程。此外,我们还表明,电导测量可用于部分测序表皮生长因子受体底物的肽,并可区分肽与其磷酸化变体。

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本文引用的文献

1
Single-molecule spectroscopy of amino acids and peptides by recognition tunnelling.通过识别隧道对氨基酸和肽的单分子光谱研究。
Nat Nanotechnol. 2014 Jun;9(6):466-73. doi: 10.1038/nnano.2014.54. Epub 2014 Apr 6.
2
Integrated proteomic analysis of post-translational modifications by serial enrichment.串联富集的翻译后修饰的综合蛋白质组学分析。
Nat Methods. 2013 Jul;10(7):634-7. doi: 10.1038/nmeth.2518. Epub 2013 Jun 9.
3
Mass spectrometry-based targeted proteomics.基于质谱的靶向蛋白质组学。
在物理极限下通过功能酶驱动测定法对肽翻译后修饰进行无标记电子检测。
Cell Rep Phys Sci. 2024 Aug 21;5(8):101874. doi: 10.1016/j.xcrp.2024.101874.
4
Single-Molecule Bioelectronic Sensors with AI-Aided Data Analysis: Convergence and Challenges.具有人工智能辅助数据分析的单分子生物电子传感器:融合与挑战
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Single-molecule detection of modified amino acid regulating transcriptional activity.修饰氨基酸调控转录活性的单分子检测
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Amplifiable protein identification via residue-resolved barcoding and composition code counting.通过残基分辨条形码和组成代码计数实现可扩增蛋白质鉴定
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7
Electromigrated Gold Nanogap Tunnel Junction Arrays: Fabrication and Electrical Behavior in Liquid and Gaseous Media.电迁移金纳米间隙隧道结阵列:在液体和气体介质中的制备及电学行为
ACS Appl Mater Interfaces. 2024 Jul 17;16(28):37131-37146. doi: 10.1021/acsami.4c03282. Epub 2024 Jul 2.
8
Single-Molecule Electrical Profiling of Peptides and Proteins.肽和蛋白质的单分子电学分析
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Cataloguing the proteome: Current developments in single-molecule protein sequencing.蛋白质组编目:单分子蛋白质测序的当前进展
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One step forward for nanopore protein sequencing.纳米孔蛋白质测序向前迈进了一步。
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