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卢氏赤杆菌新种,从潮滩沉积物中分离得到。

Erythrobacter lutimaris sp. nov., isolated from a tidal flat sediment.

作者信息

Jung Yong-Taek, Park Sooyeon, Lee Jung-Sook, Yoon Jung-Hoon

机构信息

University of Science and Technology (UST), 113 Gwahangno, Yuseong, Daejeon, Republic of Korea.

Department of Food Science and Biotechnology, Sungkyunkwan University, Jangan-gu, Suwon, Republic of Korea.

出版信息

Int J Syst Evol Microbiol. 2014 Dec;64(Pt 12):4184-4190. doi: 10.1099/ijs.0.067728-0. Epub 2014 Sep 24.

DOI:10.1099/ijs.0.067728-0
PMID:25253070
Abstract

A Gram-stain-negative, non-motile, coccoid- or oval-shaped bacterial strain, designated S-5(T), belonging to the class Alphaproteobacteria, was isolated from a tidal flat sediment of the Yellow Sea, Korea and was subjected to a polyphasic taxonomic study. Strain S-5(T) grew optimally at pH 7.0-8.0, at 30 °C and in the presence of 2-3 % (w/v) NaCl. Neighbour-joining analysis based on 16S rRNA gene sequences showed that strain S-5(T) fell within the clade comprising the species of the genus Erythrobacter, clustering with the type strains of Erythrobacter pelagi, Erythrobacter citreus and Erythrobacter seohaensis with which it exhibited the highest 16S rRNA gene sequence similarity (96.0-96.7 %). The DNA G+C content was 66.0 mol%. Strain S-5(T) contained Q-10 as the predominant ubiquinone and summed feature 8 (C18 : 1ω7c and/or C18 : 1ω6c) and C17 : 1ω6c as the major fatty acids. The major polar lipids were sphingoglycolipid, phosphatidylcholine, phosphatidylglycerol, an unidentified glycolipid and two unidentified lipids. Differential phenotypic properties, together with the phylogenetic and genetic distinctiveness, demonstrated that strain S-5(T) is distinguishable from other species of the genus Erythrobacter. On the basis of the data presented, strain S-5(T) is considered to represent a novel species of the genus Erythrobacter, for which the name Erythrobacter lutimaris sp. nov. is proposed. The type strain is S-5(T) ( = KCTC 42109(T) = CECT 8624(T)).

摘要

从韩国黄海潮滩沉积物中分离出一株革兰氏阴性、无运动性、球状或椭圆形的细菌菌株,命名为S-5(T),属于α-变形菌纲,并对其进行了多相分类研究。菌株S-5(T)在pH 7.0-8.0、30℃和2-3%(w/v)NaCl存在的条件下生长最佳。基于16S rRNA基因序列的邻接法分析表明,菌株S-5(T)属于包含红杆菌属物种的进化枝,与海洋红杆菌、柠檬红杆菌和西海红杆菌的模式菌株聚类,其16S rRNA基因序列相似性最高(96.0-96.7%)。DNA G+C含量为66.0 mol%。菌株S-5(T)以Q-10作为主要泛醌,主要脂肪酸为总和特征8(C18:1ω7c和/或C18:1ω6c)和C17:1ω6c。主要极性脂为鞘糖脂、磷脂酰胆碱、磷脂酰甘油、一种未鉴定的糖脂和两种未鉴定的脂类。不同的表型特征,以及系统发育和遗传独特性,表明菌株S-5(T)可与红杆菌属的其他物种区分开来。根据所提供的数据,菌株S-5(T)被认为代表红杆菌属的一个新物种,为此提出新名称海洋红杆菌(Erythrobacter lutimaris sp. nov.)。模式菌株为S-5(T)(=KCTC 42109(T)=CECT 8624(T))。

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