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Effects of geometry and chemistry on hydrophobic solvation.
Proc Natl Acad Sci U S A. 2014 Oct 14;111(41):14681-6. doi: 10.1073/pnas.1406080111. Epub 2014 Sep 25.
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Dynamic hydration shell restores Kauzmann's 1959 explanation of how the hydrophobic factor drives protein folding.
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4
Multibody correlations in the hydrophobic solvation of glycine peptides.
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Solvation free energies of alanine peptides: the effect of flexibility.
J Phys Chem B. 2013 Dec 27;117(51):16428-35. doi: 10.1021/jp409693p. Epub 2013 Dec 13.
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Examining the assumptions underlying continuum-solvent models.
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Comparison Study of Polar and Nonpolar Contributions to Solvation Free Energy.
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Coupling hydrophobicity, dispersion, and electrostatics in continuum solvent models.
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The importance of excluded solvent volume effects in computing hydration free energies.
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Solvation thermodynamics from cavity shapes of amino acids.
PNAS Nexus. 2023 Jul 26;2(8):pgad239. doi: 10.1093/pnasnexus/pgad239. eCollection 2023 Aug.
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A generalized Kirkwood implicit solvent for the polarizable AMOEBA protein model.
J Chem Phys. 2023 Aug 7;159(5). doi: 10.1063/5.0158914.
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Heterogeneous and Allosteric Role of Surface Hydration for Protein-Ligand Binding.
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Structural features of interfacial water predict the hydrophobicity of chemically heterogeneous surfaces.
Chem Sci. 2023 Jan 3;14(5):1308-1319. doi: 10.1039/d2sc02856e. eCollection 2023 Feb 1.
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Nanocellulosics in Transient Technology.
ACS Omega. 2022 Dec 12;7(51):47547-47566. doi: 10.1021/acsomega.2c05848. eCollection 2022 Dec 27.
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Learning the relationship between nanoscale chemical patterning and hydrophobicity.
Proc Natl Acad Sci U S A. 2022 Nov 29;119(48):e2200018119. doi: 10.1073/pnas.2200018119. Epub 2022 Nov 21.
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Quantitative description of a contractile macromolecular machine.
Sci Adv. 2021 Jun 11;7(24). doi: 10.1126/sciadv.abf9601. Print 2021 Jun.
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Implicit Solvents for the Polarizable Atomic Multipole AMOEBA Force Field.
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Identifying hydrophobic protein patches to inform protein interaction interfaces.
Proc Natl Acad Sci U S A. 2021 Feb 9;118(6). doi: 10.1073/pnas.2018234118.
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How the Shape and Chemistry of Molecular Penetrants Control Responsive Hydrogel Permeability.
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Solvation free energies of alanine peptides: the effect of flexibility.
J Phys Chem B. 2013 Dec 27;117(51):16428-35. doi: 10.1021/jp409693p. Epub 2013 Dec 13.
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Peptide conformational preferences in osmolyte solutions: transfer free energies of decaalanine.
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Good practices in free-energy calculations.
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Backbone additivity in the transfer model of protein solvation.
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Water as an active constituent in cell biology.
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Van der waals picture of liquids, solids, and phase transformations.
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