Suppr超能文献

核糖体易位过程中延伸因子G的结构域IV移动之后。

Following movement of domain IV of elongation factor G during ribosomal translocation.

作者信息

Salsi Enea, Farah Elie, Dann Jillian, Ermolenko Dmitri N

机构信息

Department of Biochemistry and Biophysics and Center for RNA Biology, School of Medicine and Dentistry, University of Rochester, Rochester, NY 14642.

Department of Biochemistry and Biophysics and Center for RNA Biology, School of Medicine and Dentistry, University of Rochester, Rochester, NY 14642

出版信息

Proc Natl Acad Sci U S A. 2014 Oct 21;111(42):15060-5. doi: 10.1073/pnas.1410873111. Epub 2014 Oct 6.

Abstract

Translocation of mRNA and tRNAs through the ribosome is catalyzed by a universally conserved elongation factor (EF-G in prokaryotes and EF-2 in eukaryotes). Previous studies have suggested that ribosome-bound EF-G undergoes significant structural rearrangements. Here, we follow the movement of domain IV of EF-G, which is critical for the catalysis of translocation, relative to protein S12 of the small ribosomal subunit using single-molecule FRET. We show that ribosome-bound EF-G adopts distinct conformations corresponding to the pre- and posttranslocation states of the ribosome. Our results suggest that, upon ribosomal translocation, domain IV of EF-G moves toward the A site of the small ribosomal subunit and facilitates the movement of peptidyl-tRNA from the A to the P site. We found no evidence of direct coupling between the observed movement of domain IV of EF-G and GTP hydrolysis. In addition, our results suggest that the pretranslocation conformation of the EF-G-ribosome complex is significantly less stable than the posttranslocation conformation. Hence, the structural rearrangement of EF-G makes a considerable energetic contribution to promoting tRNA translocation.

摘要

信使核糖核酸(mRNA)和转运核糖核酸(tRNA)通过核糖体的易位过程由一种普遍保守的延伸因子催化(原核生物中为EF-G,真核生物中为EF-2)。先前的研究表明,结合在核糖体上的EF-G会发生显著的结构重排。在此,我们利用单分子荧光共振能量转移技术,追踪EF-G的结构域IV相对于小核糖体亚基的蛋白质S12的运动,该结构域对易位催化至关重要。我们发现,结合在核糖体上的EF-G呈现出与核糖体易位前和易位后状态相对应的不同构象。我们的结果表明,在核糖体易位时,EF-G的结构域IV向小核糖体亚基的A位点移动,并促进肽基-tRNA从A位点向P位点的移动。我们没有发现EF-G结构域IV的观察到的运动与鸟苷三磷酸(GTP)水解之间存在直接偶联的证据。此外,我们的结果表明,EF-G-核糖体复合物的易位前构象比易位后构象的稳定性显著更低。因此,EF-G的结构重排对促进tRNA易位做出了相当大的能量贡献。

相似文献

1
2
Movement of elongation factor G between compact and extended conformations.延伸因子 G 在紧凑和延伸构象之间的移动。
J Mol Biol. 2015 Jan 30;427(2):454-67. doi: 10.1016/j.jmb.2014.11.010. Epub 2014 Nov 15.
3
Translocation as continuous movement through the ribosome.易位作为通过核糖体的连续移动。
RNA Biol. 2016 Dec;13(12):1197-1203. doi: 10.1080/15476286.2016.1240140. Epub 2016 Nov 1.
5
Structure of the ribosome with elongation factor G trapped in the pretranslocation state.核糖体与延伸因子 G 处于预移位状态的结构。
Proc Natl Acad Sci U S A. 2013 Dec 24;110(52):20994-9. doi: 10.1073/pnas.1311423110. Epub 2013 Dec 9.

引用本文的文献

1
Life is chemistry plus information.生命是化学加上信息。
BBA Adv. 2025 Apr 25;7:100162. doi: 10.1016/j.bbadva.2025.100162. eCollection 2025.
3
The role of GTP hydrolysis by EF-G in ribosomal translocation.EF-G 介导的 GTP 水解在核糖体移位中的作用。
Proc Natl Acad Sci U S A. 2022 Nov;119(44):e2212502119. doi: 10.1073/pnas.2212502119. Epub 2022 Oct 25.
5
The energetics of subunit rotation in the ribosome.核糖体中亚基旋转的能量学
Biophys Rev. 2021 Dec 4;13(6):1029-1037. doi: 10.1007/s12551-021-00877-8. eCollection 2021 Dec.
7
Ribosome as a Translocase and Helicase.核糖体作为移位酶和解旋酶。
Biochemistry (Mosc). 2021 Aug;86(8):992-1002. doi: 10.1134/S0006297921080095.

本文引用的文献

1
Dual use of GTP hydrolysis by elongation factor G on the ribosome.延伸因子G在核糖体上对GTP水解的双重利用。
Translation (Austin). 2013 Apr 1;1(1):e24315. doi: 10.4161/trla.24315. eCollection 2013.
4
Structure of the ribosome with elongation factor G trapped in the pretranslocation state.核糖体与延伸因子 G 处于预移位状态的结构。
Proc Natl Acad Sci U S A. 2013 Dec 24;110(52):20994-9. doi: 10.1073/pnas.1311423110. Epub 2013 Dec 9.
5
Structure of EF-G-ribosome complex in a pretranslocation state.EF-G-核糖体复合物在易位前状态下的结构。
Nat Struct Mol Biol. 2013 Sep;20(9):1077-84. doi: 10.1038/nsmb.2645. Epub 2013 Aug 4.
10
Rotation of the head of the 30S ribosomal subunit during mRNA translocation.30S 核糖体亚基头部在 mRNA 转位过程中的旋转。
Proc Natl Acad Sci U S A. 2012 Dec 11;109(50):20391-4. doi: 10.1073/pnas.1218999109. Epub 2012 Nov 27.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验