Gomes Johnny Moreira, Alvarenga Adriele, Campos Ricardo Silva, Rocha Bernardo Martins, da Silva Ana Paula Couto, dos Santos Rodrigo Weber
IEEE Trans Biomed Eng. 2015 Feb;62(2):600-8. doi: 10.1109/TBME.2014.2361325. Epub 2014 Oct 3.
This paper compares different numerical methods for the solution of myocyte models of cardiac electrophysiology. In particular, it presents how the technique called uniformization method substantially increases the stability of simple first-order methods such as Euler explicit method and Rush-Larsen (RL) method, for the solution of modern electrophysiology models that are based on continuous-time Markov chains (MCs) for the description of subcellular structures, such as ion channels. The MCs are often associated with stiff ordinary differential equations that severely limit the time step used by these traditional methods. By using the uniformization method, we could significantly increase the time steps for the solution of different cardiac electrophysiology models and improve the computational performance up to 150 times compared to the performance of Euler's and RL's methods.
本文比较了用于求解心脏电生理学心肌细胞模型的不同数值方法。特别地,它展示了一种称为均匀化方法的技术如何显著提高简单一阶方法(如欧拉显式方法和拉什 - 拉森(RL)方法)的稳定性,以求解基于连续时间马尔可夫链(MCs)来描述亚细胞结构(如离子通道)的现代电生理学模型。MCs 通常与刚性常微分方程相关联,这严重限制了这些传统方法所使用的时间步长。通过使用均匀化方法,我们能够显著增加求解不同心脏电生理学模型的时间步长,并且与欧拉方法和 RL 方法相比,将计算性能提高了多达 150 倍。