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本文引用的文献

1
A targeted RNA interference screen reveals novel epigenetic factors that regulate herpesviral gene expression.一项靶向RNA干扰筛选揭示了调控疱疹病毒基因表达的新型表观遗传因子。
mBio. 2014 Feb 4;5(1):e01086-13. doi: 10.1128/mBio.01086-13.
2
Epigenetic repression of herpes simplex virus infection by the nucleosome remodeler CHD3.核小体重塑因子CHD3对单纯疱疹病毒感染的表观遗传抑制作用
mBio. 2014 Jan 14;5(1):e01027-13. doi: 10.1128/mBio.01027-13.
3
Chromatin dynamics during lytic infection with herpes simplex virus 1.单纯疱疹病毒 1 溶原性感染过程中的染色质动力学。
Viruses. 2013 Jul 16;5(7):1758-86. doi: 10.3390/v5071758.
4
A novel selective LSD1/KDM1A inhibitor epigenetically blocks herpes simplex virus lytic replication and reactivation from latency.一种新型选择性 LSD1/KDM1A 抑制剂通过表观遗传阻断单纯疱疹病毒从潜伏状态向裂解复制和再激活的转变。
mBio. 2013 Feb 5;4(1):e00558-12. doi: 10.1128/mBio.00558-12.
5
Targeting the JMJD2 histone demethylases to epigenetically control herpesvirus infection and reactivation from latency.靶向 JMJD2 组蛋白去甲基化酶以表观遗传控制疱疹病毒感染和潜伏后再激活。
Sci Transl Med. 2013 Jan 9;5(167):167ra5. doi: 10.1126/scitranslmed.3005145.
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Transcriptional coactivator HCF-1 couples the histone chaperone Asf1b to HSV-1 DNA replication components.转录共激活因子 HCF-1 将组蛋白伴侣 Asf1b 与 HSV-1 DNA 复制成分偶联。
Proc Natl Acad Sci U S A. 2010 Feb 9;107(6):2461-6. doi: 10.1073/pnas.0911128107. Epub 2010 Jan 21.
7
PrimerBank: a resource of human and mouse PCR primer pairs for gene expression detection and quantification.PrimerBank:一个用于基因表达检测和定量的人类和小鼠 PCR 引物对资源。
Nucleic Acids Res. 2010 Jan;38(Database issue):D792-9. doi: 10.1093/nar/gkp1005. Epub 2009 Nov 11.
8
Inhibition of the histone demethylase LSD1 blocks alpha-herpesvirus lytic replication and reactivation from latency.组蛋白去甲基化酶LSD1的抑制作用可阻断α-疱疹病毒的裂解复制及从潜伏状态的重新激活。
Nat Med. 2009 Nov;15(11):1312-7. doi: 10.1038/nm.2051. Epub 2009 Oct 25.
9
Control of alpha-herpesvirus IE gene expression by HCF-1 coupled chromatin modification activities.通过HCF-1偶联的染色质修饰活性对α-疱疹病毒IE基因表达的调控
Biochim Biophys Acta. 2010 Mar-Apr;1799(3-4):257-65. doi: 10.1016/j.bbagrm.2009.08.003. Epub 2009 Aug 12.
10
A comprehensive collection of experimentally validated primers for Polymerase Chain Reaction quantitation of murine transcript abundance.用于定量小鼠转录本丰度的聚合酶链反应的经实验验证引物的综合集合。
BMC Genomics. 2008 Dec 24;9:633. doi: 10.1186/1471-2164-9-633.

裂解感染期间单纯疱疹病毒基因表达的定量分析

Quantitative Analysis of HSV Gene Expression during Lytic Infection.

作者信息

Turner Anne-Marie W, Arbuckle Jesse H, Kristie Thomas M

机构信息

Laboratory of Viral Diseases, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, Maryland.

出版信息

Curr Protoc Microbiol. 2014 Nov 3;35:14E.5.1-27. doi: 10.1002/9780471729259.mc14e05s35.

DOI:10.1002/9780471729259.mc14e05s35
PMID:25367270
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4238182/
Abstract

Herpes Simplex Virus (HSV) is a human pathogen that establishes latency and undergoes periodic reactivation, resulting in chronic recurrent lytic infection. HSV lytic infection is characterized by an organized cascade of three gene classes; however, successful transcription and expression of the first, the immediate early class, is critical to the overall success of viral infection. This initial event of lytic infection is also highly dependent on host cell factors. This unit uses RNA interference and small molecule inhibitors to examine the role of host and viral proteins in HSV lytic infection. Methods detailing isolation of viral and host RNA and genomic DNA followed by quantitative real-time PCR allow characterization of impacts on viral transcription and replication, respectively. Western blots can be used to confirm quantitative PCR results. This combination of protocols represents a starting point for researchers interested in virus-host interactions during HSV lytic infection.

摘要

单纯疱疹病毒(HSV)是一种人类病原体,它会建立潜伏状态并周期性地重新激活,导致慢性复发性裂解感染。HSV裂解感染的特征是有组织地级联表达三类基因;然而,第一类即立即早期基因的成功转录和表达对于病毒感染的整体成功至关重要。裂解感染的这一初始事件也高度依赖宿主细胞因子。本单元使用RNA干扰和小分子抑制剂来研究宿主和病毒蛋白在HSV裂解感染中的作用。详细介绍病毒和宿主RNA及基因组DNA分离方法,随后进行定量实时PCR的方法,分别可以表征对病毒转录和复制的影响。蛋白质免疫印迹可用于确认定量PCR结果。这些实验方案的组合为对HSV裂解感染期间病毒-宿主相互作用感兴趣的研究人员提供了一个起点。