Tebbji Faiza, Chen Yaolin, Richard Albert Julien, Gunsalus Kearney T W, Kumamoto Carol A, Nantel André, Sellam Adnane, Whiteway Malcolm
Department of Biology, McGill University, Montreal, Quebec, Canada; Department of Biology, Concordia University, Montreal, Quebec, Canada.
Department of Biology, Concordia University, Montreal, Quebec, Canada.
PLoS Genet. 2014 Nov 6;10(11):e1004770. doi: 10.1371/journal.pgen.1004770. eCollection 2014 Nov.
Mediator is a multi-subunit protein complex that regulates gene expression in eukaryotes by integrating physiological and developmental signals and transmitting them to the general RNA polymerase II machinery. We examined, in the fungal pathogen Candida albicans, a set of conditional alleles of genes encoding Mediator subunits of the head, middle, and tail modules that were found to be essential in the related ascomycete Saccharomyces cerevisiae. Intriguingly, while the Med4, 8, 10, 11, 14, 17, 21 and 22 subunits were essential in both fungi, the structurally highly conserved Med7 subunit was apparently non-essential in C. albicans. While loss of CaMed7 did not lead to loss of viability under normal growth conditions, it dramatically influenced the pathogen's ability to grow in different carbon sources, to form hyphae and biofilms, and to colonize the gastrointestinal tracts of mice. We used epitope tagging and location profiling of the Med7 subunit to examine the distribution of the DNA sites bound by Mediator during growth in either the yeast or the hyphal form, two distinct morphologies characterized by different transcription profiles. We observed a core set of 200 genes bound by Med7 under both conditions; this core set is expanded moderately during yeast growth, but is expanded considerably during hyphal growth, supporting the idea that Mediator binding correlates with changes in transcriptional activity and that this binding is condition specific. Med7 bound not only in the promoter regions of active genes but also within coding regions and at the 3' ends of genes. By combining genome-wide location profiling, expression analyses and phenotyping, we have identified different Med7p-influenced regulons including genes related to glycolysis and the Filamentous Growth Regulator family. In the absence of Med7, the ribosomal regulon is de-repressed, suggesting Med7 is involved in central aspects of growth control.
中介体是一种多亚基蛋白质复合物,通过整合生理和发育信号并将其传递给通用的RNA聚合酶II机制,来调节真核生物中的基因表达。我们在真菌病原体白色念珠菌中研究了一组编码中介体头部、中部和尾部模块亚基的基因的条件等位基因,这些基因在相关的子囊菌酿酒酵母中被发现是必需的。有趣的是,虽然Med4、8、10、11、14、17、21和22亚基在两种真菌中都是必需的,但结构上高度保守的Med7亚基在白色念珠菌中显然是非必需的。虽然CaMed7的缺失在正常生长条件下不会导致生存能力丧失,但它极大地影响了病原体在不同碳源中生长、形成菌丝和生物膜以及在小鼠胃肠道中定殖的能力。我们使用Med7亚基的表位标签和定位分析来检查在酵母或菌丝体形式(两种以不同转录谱为特征的不同形态)生长过程中中介体结合的DNA位点的分布。我们观察到在两种条件下有一组由Med7结合的200个核心基因;这个核心集在酵母生长期间适度扩展,但在菌丝生长期间大幅扩展,支持了中介体结合与转录活性变化相关且这种结合是条件特异性的观点。MedZ不仅结合在活性基因的启动子区域,还结合在编码区域内和基因的3'端。通过结合全基因组定位分析、表达分析和表型分析,我们确定了不同的受Med7p影响的调控子,包括与糖酵解和丝状生长调节因子家族相关的基因。在没有Med7的情况下,核糖体调控子被解除抑制,表明Med7参与生长控制的核心方面。