IGN, Faculty of Science, University of Copenhagen, Rolighedsvej 23, 1958 Frederiksberg, Denmark.
Biotechnol Biofuels. 2014 Nov 19;7(1):159. doi: 10.1186/s13068-014-0159-x. eCollection 2014.
Studies in bioconversions have continuously sought the development of processing strategies to overcome the "close physical association" between plant cell wall polymers thought to significantly contribute to biomass recalcitrance [Adv Space Res 18:251-265, 1996],[ Science 315:804-807, 2007]. To a lesser extent, studies have sought to understand biophysical factors responsible for the resistance of lignocelluloses to enzymatic degradation. Provided here are data supporting our hypothesis that the inhibitory potential of different cell wall polymers towards enzymatic cellulose hydrolysis is related to how much these polymers constrain the water surrounding them. We believe the entropy-reducing constraint imparted to polymer associated water plays a negative role by increasing the probability of detrimental interactions such as junction zone formation and the non-productive binding of enzymes.
Selected commercial lignocellulose-derived polymers, including hemicelluloses, pectins, and lignin, showed varied potential to inhibit 24-h cellulose conversion by a mix of purified cellobiohydrolase I and β-glucosidase. At low dry matter loadings (0.5% w/w), insoluble hemicelluloses were most inhibitory (reducing conversion relative to cellulose-only controls by about 80%) followed by soluble xyloglucan and wheat arabinoxylan (reductions of about 70% and 55%, respectively), while the lignin and pectins tested were the least inhibitory (approximately 20% reduction). Low field nuclear magnetic resonance (LF-NMR) relaxometry used to observe water-related proton relaxation in saturated polymer suspensions (10% dry solids, w/w) showed spin-spin, T2, relaxation time curves generally approached zero faster for the most inhibitory polymer preparations. The manner of this decline varied between polymers, indicating different biophysical aspects may differentially contribute to overall water constraint in each case. To better compare the LF-NMR data to inhibitory potential, T2 values from monocomponent exponential fits of relaxation curves were used as a measure of overall water constraint. These values generally correlated faster relaxation times (greater water constraint) with greater inhibition of the model cellulase system by the polymers.
The presented correlation of cellulase inhibition and proton relaxation data provides support for our water constraint-biomass recalcitrance hypothesis. Deeper investigation into polymer-cellulose-cellulase interactions should help elucidate the types of interactions that may be propagating this correlation. If these observations can be verified to be more than correlative, the hypothesis and data presented suggest that a focus on water-polymer interactions and ways to alter them may help resolve key biological lignocellulose processing bottlenecks.
生物转化研究不断寻求开发加工策略,以克服被认为对生物质抗降解性有重大贡献的植物细胞壁聚合物之间的“紧密物理关联”[Adv Space Res 18:251-265, 1996],[Science 315:804-807, 2007]。在较小程度上,研究试图了解负责木质纤维素抵抗酶解的生物物理因素。本文提供的数据支持我们的假设,即不同细胞壁聚合物对酶解纤维素水解的抑制潜力与这些聚合物对周围水的约束程度有关。我们认为,聚合物相关水的熵减少约束通过增加形成连接区和酶非生产性结合等不利相互作用的可能性,起到了负面作用。
所选的商业木质纤维素衍生聚合物,包括半纤维素、果胶和木质素,对混合纯化的纤维二糖水解酶 I 和β-葡萄糖苷酶的 24 小时纤维素转化表现出不同的抑制潜力。在低干物质负荷(0.5%w/w)下,不溶性半纤维素的抑制作用最大(相对于纤维素对照物减少约 80%),其次是可溶性木葡聚糖和麦麸阿拉伯木聚糖(分别减少约 70%和 55%),而测试的木质素和果胶的抑制作用最小(约减少 20%)。低场核磁共振(LF-NMR)弛豫测量用于观察饱和聚合物悬浮液(10%干固体,w/w)中与水相关的质子弛豫,自旋-自旋、T2、弛豫时间曲线通常对于最具抑制性的聚合物制剂更快地趋近于零。这种下降的方式在聚合物之间有所不同,表明不同的生物物理方面可能在每种情况下对整体水约束产生不同的影响。为了更好地将 LF-NMR 数据与抑制潜力进行比较,使用单组分指数拟合弛豫曲线的 T2 值作为整体水约束的度量。这些值通常与更快的弛豫时间(更大的水约束)相关,与聚合物对模型纤维素酶系统的抑制作用更强相关。
本文提出的纤维素酶抑制与质子弛豫数据的相关性为我们的水约束-生物质抗降解性假说提供了支持。对聚合物-纤维素-纤维素酶相互作用的更深入研究应该有助于阐明可能传播这种相关性的相互作用类型。如果这些观察结果能够被证明不仅仅是相关的,那么提出的假设和数据表明,关注水-聚合物相互作用及其改变方式可能有助于解决关键的木质纤维素生物加工瓶颈。