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大肠杆菌的UmuC诱变蛋白:纯化及其与UmuD和UmuD'的相互作用。

UmuC mutagenesis protein of Escherichia coli: purification and interaction with UmuD and UmuD'.

作者信息

Woodgate R, Rajagopalan M, Lu C, Echols H

机构信息

Department of Molecular Biology, University of California, Berkeley 94720.

出版信息

Proc Natl Acad Sci U S A. 1989 Oct;86(19):7301-5. doi: 10.1073/pnas.86.19.7301.

DOI:10.1073/pnas.86.19.7301
PMID:2552436
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC298049/
Abstract

The introduction of a replication-inhibiting lesion into the DNA of Escherichia coli produces a marked elevation in mutation rate. The mutation pathway is a component of the induced, multigene SOS response. SOS mutagenesis is a tightly regulated process dependent on two RecA-mediated proteolytic events: cleavage of the LexA repressor to induce the UmuC and UmuD mutagenesis proteins, and cleavage of UmuD to UmuD' to activate the mutation pathway. To investigate the protein-protein interactions responsible for SOS mutagenesis, we have studied the interaction of UmuC, UmuD, and UmuD'. To probe intracellular interaction, we have used immunoprecipitation techniques with antibodies against UmuC or UmuD and UmuD'. We have found that antibody to UmuC precipitates UmuD' from cell extracts, and antibody to UmuD and UmuD' precipitates UmuC. Thus we conclude that UmuC probably associates tightly with UmuD' in cells. For biochemical studies, we have purified the UmuC and UmuD' proteins to use with the previously purified UmuD. UmuC associates strongly with an affinity column of UmuD and UmuD', eluting only under strongly dissociating conditions (2 M urea or 1.5 M KSCN). UmuC also associates efficiently with UmuD or UmuD' in solution, as judged by velocity sedimentation in a glycerol gradient. The likely stoichiometry is one UmuC with a dimeric UmuD or UmuD'. From these experiments and previous work, we infer that SOS mutagenesis depends on the action of the UmuC-UmuD' complex and probably RecA to rescue a stalled DNA polymerase III holoenzyme at the DNA lesion.

摘要

在大肠杆菌的DNA中引入复制抑制性损伤会导致突变率显著升高。突变途径是诱导型多基因SOS应答的一个组成部分。SOS诱变是一个严格调控的过程,依赖于两个RecA介导的蛋白水解事件:LexA阻遏物的切割以诱导UmuC和UmuD诱变蛋白,以及UmuD切割为UmuD'以激活突变途径。为了研究负责SOS诱变的蛋白质-蛋白质相互作用,我们研究了UmuC、UmuD和UmuD'之间的相互作用。为了探测细胞内的相互作用,我们使用了针对UmuC或UmuD以及UmuD'的抗体进行免疫沉淀技术。我们发现,抗UmuC抗体能从细胞提取物中沉淀出UmuD',抗UmuD和UmuD'抗体能沉淀出UmuC。因此我们得出结论,UmuC在细胞中可能与UmuD'紧密结合。为了进行生化研究,我们纯化了UmuC和UmuD'蛋白,以便与之前纯化的UmuD一起使用。UmuC与UmuD和UmuD'的亲和柱强烈结合,仅在强解离条件下(2 M尿素或1.5 M KSCN)洗脱。通过甘油梯度中的速度沉降判断,UmuC在溶液中也能有效地与UmuD或UmuD'结合。可能的化学计量比是一个UmuC与一个二聚体UmuD或UmuD'结合。从这些实验和之前的工作中,我们推断SOS诱变依赖于UmuC-UmuD'复合物的作用,可能还依赖于RecA来拯救在DNA损伤处停滞的DNA聚合酶III全酶。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bcfc/298049/ff3bea4e859d/pnas00286-0014-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bcfc/298049/5eb6f47ce621/pnas00286-0013-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bcfc/298049/6a31227ba78b/pnas00286-0013-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bcfc/298049/1a08106a6ba3/pnas00286-0014-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bcfc/298049/ff3bea4e859d/pnas00286-0014-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bcfc/298049/5eb6f47ce621/pnas00286-0013-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bcfc/298049/6a31227ba78b/pnas00286-0013-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bcfc/298049/1a08106a6ba3/pnas00286-0014-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bcfc/298049/ff3bea4e859d/pnas00286-0014-b.jpg

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细菌核糖体蛋白的核糖体外功能——2023年最新进展
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