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为了维护更灵活的生物部件注册库,将装配和提交标准解耦。

The case for decoupling assembly and submission standards to maintain a more flexible registry of biological parts.

机构信息

Department of Molecular Biosciences, Institute for Cellular and Molecular Biology, Center for Systems and Synthetic Biology, The University of Texas at Austin, Austin, Texas 78712 USA.

出版信息

J Biol Eng. 2014 Dec 1;8(1):28. doi: 10.1186/1754-1611-8-28. eCollection 2014.

Abstract

The Registry of Standard Biological Parts only accepts genetic parts compatible with the RFC 10 BioBrick format. This combined assembly and submission standard requires that four unique restriction enzyme sites must not occur in the DNA sequence encoding a part. We present evidence that this requirement places a nontrivial burden on iGEM teams developing large and novel parts. We further argue that the emergence of inexpensive DNA synthesis and versatile assembly methods reduces the utility of coupling submission and assembly standards and propose a submission standard that is compatible with current quality control strategies while nearly eliminating sequence constraints on submitted parts.

摘要

标准生物部件注册中心仅接受与 RFC 10 BioBrick 格式兼容的遗传部件。这种组合的组装和提交标准要求在编码部件的 DNA 序列中不能出现四个独特的限制酶位点。我们提供的证据表明,这一要求给开发大型和新颖部件的 iGEM 团队带来了不小的负担。我们进一步认为,廉价的 DNA 合成和多功能组装方法的出现降低了结合提交和组装标准的实用性,并提出了一种提交标准,该标准与当前的质量控制策略兼容,同时几乎消除了提交部件的序列限制。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3d54/4269934/5e61bd34b90c/13036_2014_159_Fig1_HTML.jpg

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