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在苏云金芽孢杆菌中,γ-氨基丁酸或琥珀酸半醛对gab簇转录的激活作用由依赖于σ⁵⁴的转录激活因子GabR介导。

Activation of gab cluster transcription in Bacillus thuringiensis by γ-aminobutyric acid or succinic semialdehyde is mediated by the Sigma 54-dependent transcriptional activator GabR.

作者信息

Peng Qi, Yang Min, Wang Wei, Han Lili, Wang Guannan, Wang Pengyue, Zhang Jie, Song Fuping

机构信息

State Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing, China.

College of Life Sciences, Northeast Agriculture University, Harbin, China.

出版信息

BMC Microbiol. 2014 Dec 20;14:306. doi: 10.1186/s12866-014-0306-3.

Abstract

BACKGROUND

Bacillus thuringiensis GabR is a Sigma 54-dependent transcriptional activator containing three typical domains, an N-terminal regulatory domain Per-ARNT-Sim (PAS), a central AAA(+) (ATPases associated with different cellular activities) domain and a C-terminal helix-turn-helix (HTH) DNA binding domain. GabR positively regulates the expression of the gabT gene of the gab gene cluster, which is responsible for the γ-aminobutyric acid (GABA) shunt.

RESULTS

Purified GabR was shown to specifically bind to a repeat region that mapped 58 bp upstream of the gabT start codon. The specific signal factors GABA and succinic semialdehyde (SSA) activated gabT expression, whereas GABA- and SSA-inducible gabT transcription was abolished in sigL and gabR mutants. GABA and SSA did not induce the expression of either SigL or GabR. Deletion of the PAS domain of GabR resulted in increased gabT transcriptional activity, both in the presence and absence of GABA.

CONCLUSIONS

This study identified the GabR-binding site on the gabT promoter; however, GabR does not bind to its own promoter. gabT transcription is induced by GABA and SSA, and inducible expression is dependent on SigL and activated by GabR. The PAS domain in GabR is repressing its enhancer transcriptional activity on the gabT promoter. Repression is released upon GABA addition, whereupon transcription is induced.

摘要

背景

苏云金芽孢杆菌GabR是一种依赖于Sigma 54的转录激活因子,包含三个典型结构域,一个N端调节结构域Per-ARNT-Sim(PAS)、一个中央AAA(+)(与不同细胞活动相关的ATP酶)结构域和一个C端螺旋-转角-螺旋(HTH)DNA结合结构域。GabR正向调节gab基因簇中gabT基因的表达,该基因簇负责γ-氨基丁酸(GABA)分流。

结果

纯化的GabR被证明能特异性结合到gabT起始密码子上游58 bp处的一个重复区域。特异性信号因子GABA和琥珀酸半醛(SSA)激活gabT表达,而在sigL和gabR突变体中,GABA和SSA诱导的gabT转录被消除。GABA和SSA均不诱导SigL或GabR的表达。删除GabR的PAS结构域导致在有和没有GABA的情况下,gabT转录活性均增加。

结论

本研究确定了gabT启动子上的GabR结合位点;然而,GabR不与其自身启动子结合。gabT转录由GABA和SSA诱导,诱导表达依赖于SigL并由GabR激活。GabR中的PAS结构域抑制其对gabT启动子的增强子转录活性。添加GABA后抑制被解除,随后转录被诱导。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/571a/4279683/57c7b55ad8c4/12866_2014_306_Fig1_HTML.jpg

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