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来自鱼腥藻属M-131菌株的新型结构插入序列(IS891)的特性分析

Characterization of an insertion sequence (IS891) of novel structure from the cyanobacterium Anabaena sp. strain M-131.

作者信息

Bancroft I, Wolk C P

机构信息

MSU-DOE Plant Research Laboratory, Michigan State University, East Lansing 48824-1312.

出版信息

J Bacteriol. 1989 Nov;171(11):5949-54. doi: 10.1128/jb.171.11.5949-5954.1989.

Abstract

When recombinant plasmids that were transferred to the cyanobacterium Anabaena sp. strain M-131 were transferred back to Escherichia coli, some of the transformants contained inserts. One of the insertion sequences (ISs) was characterized by sequencing. This 1,351-base-pair IS contained an open reading frame that was capable of encoding a peptide of 310 amino acids and had terminal sequences with distinctive structures, but it lacked terminal inverted repeats and did not duplicate target DNA upon insertion. The element bore no significant sequence homology to any sequence stored in the GenBank data base. Restriction analysis of the genomes of Anabaena sp. strain M-131 and Anabaena sp. strain PCC 7120 showed those strains to be closely related. Sequences homologous to the IS element were also present in the DNA of Anabaena strain PCC 7120, but the copy numbers and chromosomal locations of such sequences differed in the two strains. The largest visualized plasmid was 425 kilobases (kb) in M-131 and 410 kb in PCC 7120; at least the former plasmid contained multiple copies of the element, as did a 115-kb plasmid in M-131.

摘要

当转移至蓝细菌鱼腥藻Anabaena sp. 菌株M-131的重组质粒再转回大肠杆菌时,一些转化子含有插入片段。其中一个插入序列(IS)通过测序进行了表征。这个1351个碱基对的IS含有一个开放阅读框,能够编码一个310个氨基酸的肽,并且具有结构独特的末端序列,但它缺乏末端反向重复序列,插入时也不会复制靶DNA。该元件与GenBank数据库中存储的任何序列均无明显的序列同源性。对鱼腥藻Anabaena sp. 菌株M-131和鱼腥藻Anabaena sp. 菌株PCC 7120的基因组进行限制性分析表明,这些菌株密切相关。与该IS元件同源的序列也存在于鱼腥藻菌株PCC 7120的DNA中,但这些序列在两个菌株中的拷贝数和染色体位置不同。在M-131中可视化的最大质粒为425千碱基(kb),在PCC 7120中为410 kb;至少前一种质粒含有该元件的多个拷贝,M-131中的一个115 kb质粒也是如此。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d3bc/210459/47c9e19072ad/jbacter00177-0202-a.jpg

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