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药物重新定位的计算和实验进展以加速治疗分层

Computational and experimental advances in drug repositioning for accelerated therapeutic stratification.

作者信息

Shameer Khader, Readhead Ben, Dudley Joel T

机构信息

Department of Genetics and Genomic Sciences, Icahn Institute for Genomics and Multiscale Biology, Icahn School of Medicine at Mount Sinai, New York, New York, USA.

出版信息

Curr Top Med Chem. 2015;15(1):5-20. doi: 10.2174/1568026615666150112103510.

Abstract

Drug repositioning is an important component of therapeutic stratification in the precision medicine paradigm. Molecular profiling and more sophisticated analysis of longitudinal clinical data are refining definitions of human diseases, creating needs and opportunities to re-target or reposition approved drugs for alternative indications. Drug repositioning studies have demonstrated success in complex diseases requiring improved therapeutic interventions as well as orphan diseases without any known treatments. An increasing collection of available computational and experimental methods that leverage molecular and clinical data enable diverse drug repositioning strategies. Integration of translational bioinformatics resources, statistical methods, chemoinformatics tools and experimental techniques (including medicinal chemistry techniques) can enable the rapid application of drug repositioning on an increasingly broad scale. Efficient tools are now available for systematic drug-repositioning methods using large repositories of compounds with biological activities. Medicinal chemists along with other translational researchers can play a key role in various aspects of drug repositioning. In this review article, we briefly summarize the history of drug repositioning, explain concepts behind drug repositioning methods, discuss recent computational and experimental advances and highlight available open access resources for effective drug repositioning investigations. We also discuss recent approaches in utilizing electronic health record for outcome assessment of drug repositioning and future avenues of drug repositioning in the light of targeting disease comorbidities, underserved patient communities, individualized medicine and socioeconomic impact.

摘要

药物重新定位是精准医学范式中治疗分层的一个重要组成部分。分子谱分析以及对纵向临床数据更复杂的分析正在完善人类疾病的定义,创造了对已批准药物进行重新靶向或重新定位以用于替代适应症的需求和机会。药物重新定位研究已在需要改进治疗干预措施的复杂疾病以及尚无任何已知治疗方法的罕见病中取得成功。越来越多利用分子和临床数据的可用计算和实验方法实现了多样化的药物重新定位策略。整合转化生物信息学资源、统计方法、化学信息学工具和实验技术(包括药物化学技术)能够使药物重新定位在越来越广泛的范围内迅速得到应用。现在有高效的工具可用于使用具有生物活性的化合物大型库的系统性药物重新定位方法。药物化学家以及其他转化研究人员可以在药物重新定位的各个方面发挥关键作用。在这篇综述文章中,我们简要总结药物重新定位的历史,解释药物重新定位方法背后的概念,讨论近期的计算和实验进展,并强调用于有效药物重新定位研究的可用开放获取资源。我们还讨论了利用电子健康记录进行药物重新定位结果评估的近期方法,以及鉴于针对疾病共病、服务不足的患者群体、个性化医疗和社会经济影响的药物重新定位的未来途径。

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