Elliot Michael G, Crespi Bernard J
St John's College, St John's Street, Cambridge, CB2 1TP, UK
Human Evolutionary Studies Program and Department of Biological Sciences, Simon Fraser University, Burnaby, British Columbia, Canada V5A 1S6.
Philos Trans R Soc Lond B Biol Sci. 2015 Mar 5;370(1663):20140069. doi: 10.1098/rstb.2014.0069.
The relationship between phenotypic variation arising through individual development and phenotypic variation arising through diversification of species has long been a central question in evolutionary biology. Among humans, reduced placental invasion into endometrial tissues is associated with diseases of pregnancy, especially pre-eclampsia, and reduced placental invasiveness has also evolved, convergently, in at least 10 lineages of eutherian mammals. We tested the hypothesis that a common genetic basis underlies both reduced placental invasion arising through a developmental process in human placental disease and reduced placental invasion found as a derived trait in the diversification of Euarchontoglires (rodents, lagomorphs, tree shrews, colugos and primates). Based on whole-genome analyses across 18 taxa, we identified 1254 genes as having evolved adaptively across all three lineages exhibiting independent evolutionary transitions towards reduced placental invasion. These genes showed strong evidence of enrichment for associations with pre-eclampsia, based on genetic-association studies, gene-expression analyses and gene ontology. We further used in silico prediction to identify a subset of 199 genes that are likely targets of natural selection during transitions in placental invasiveness and which are predicted to also underlie human placental disorders. Our results indicate that abnormal ontogenies can recapitulate major phylogenetic shifts in mammalian evolution, identify new candidate genes for involvement in pre-eclampsia, imply that study of species with less-invasive placentation will provide useful insights into the regulation of placental invasion and pre-eclampsia, and recommend a novel comparative functional-evolutionary approach to the study of genetically based human disease and mammalian diversification.
个体发育过程中产生的表型变异与物种多样化过程中产生的表型变异之间的关系,长期以来一直是进化生物学的核心问题。在人类中,胎盘对子宫内膜组织的侵入减少与妊娠疾病有关,尤其是先兆子痫,而且胎盘侵入性降低在至少10个真兽类哺乳动物谱系中也趋同进化。我们检验了这样一个假说:人类胎盘疾病中通过发育过程产生的胎盘侵入减少与真灵长总目(啮齿动物、兔形目动物、树鼩、鼯猴和灵长类动物)多样化过程中作为衍生性状出现的胎盘侵入减少具有共同的遗传基础。基于对18个分类单元的全基因组分析,我们确定了1254个基因在所有三个谱系中适应性进化,这些谱系都朝着胎盘侵入减少方向独立发生了进化转变。基于遗传关联研究、基因表达分析和基因本体论,这些基因有强有力的证据表明与先兆子痫有关联。我们进一步利用计算机预测来确定199个基因的一个子集,这些基因可能是胎盘侵入性转变过程中自然选择的目标,并且预计也是人类胎盘疾病的基础。我们的结果表明,异常个体发育可以重现哺乳动物进化中的主要系统发育转变,确定参与先兆子痫的新候选基因,意味着对胎盘侵入性较小的物种的研究将为胎盘侵入和先兆子痫的调控提供有用的见解,并推荐一种新的比较功能进化方法来研究基于遗传的人类疾病和哺乳动物多样化。