Swift Dominic G, Dunning Luke T, Igea Javier, Brooks Edward J, Jones Catherine S, Noble Leslie R, Ciezarek Adam, Humble Emily, Savolainen Vincent
Department of Life Sciences, Imperial College London, Silwood Park Campus, Buckhurst Road, Berkshire, SL5 7PY, UK.
Department of Animal and Plant Sciences, University of Sheffield, Sheffield, S10 2TN, UK.
BMC Evol Biol. 2016 Jun 14;16(1):126. doi: 10.1186/s12862-016-0696-y.
All vertebrates initially feed their offspring using yolk reserves. In some live-bearing species these yolk reserves may be supplemented with extra nutrition via a placenta. Sharks belonging to the Carcharhinidae family are all live-bearing, and with the exception of the tiger shark (Galeocerdo cuvier), develop placental connections after exhausting yolk reserves. Phylogenetic relationships suggest the lack of placenta in tiger sharks is due to secondary loss. This represents a dramatic shift in reproductive strategy, and is likely to have left a molecular footprint of positive selection within the genome.
We sequenced the transcriptome of the tiger shark and eight other live-bearing shark species. From this data we constructed a time-calibrated phylogenetic tree estimating the tiger shark lineage diverged from the placental carcharhinids approximately 94 million years ago. Along the tiger shark lineage, we identified five genes exhibiting a signature of positive selection. Four of these genes have functions likely associated with brain development (YWHAE and ARL6IP5) and sexual reproduction (VAMP4 and TCTEX1D2).
Our results indicate the loss of placenta in tiger sharks may be associated with subsequent adaptive changes in brain development and sperm production.
所有脊椎动物最初都利用卵黄储备来喂养后代。在一些胎生物种中,这些卵黄储备可能会通过胎盘获得额外的营养补充。属于真鲨科的鲨鱼都是胎生的,除了虎鲨(居氏鼬鲨),在耗尽卵黄储备后才形成胎盘连接。系统发育关系表明,虎鲨缺乏胎盘是由于次生丧失。这代表了生殖策略的巨大转变,并可能在基因组内留下正选择的分子印记。
我们对虎鲨和其他八种胎生鲨鱼物种的转录组进行了测序。根据这些数据,我们构建了一个时间校准的系统发育树,估计虎鲨谱系在大约9400万年前与有胎盘的真鲨科动物分化。在虎鲨谱系中,我们鉴定出五个表现出正选择特征的基因。其中四个基因的功能可能与大脑发育(14-3-3ε和ARL6IP5)和有性生殖(VAMP4和TCTEX1D2)相关。
我们的结果表明,虎鲨胎盘的丧失可能与随后大脑发育和精子产生的适应性变化有关。