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酿酒酵母中位于第五条染色体上的各种Ty元件转座热点区域。

A hot-spot for transposition of various Ty elements on chromosome V in Saccharomyces cerevisiae.

作者信息

Lochmüller H, Stucka R, Feldmann H

机构信息

Institut für Physiologische Chemie, Universität München, Federal Republic of Germany.

出版信息

Curr Genet. 1989 Oct;16(4):247-52. doi: 10.1007/BF00422110.

DOI:10.1007/BF00422110
PMID:2560682
Abstract

Ty4 is a novel transposable element in the yeast, Saccharomyces cerevisiae, which is present in only a few copies in the genome (Stucka et al. 1989). In strain C836 one of the three copies (Ty4-90) is contained in cosmid clone c90, where it resides on chromosome V. Analysis of this region reveals a "hot-spot" of transposition: in addition to Ty4-90, the locus contains a complete Ty3 element and seven singular delta, sigma and tau elements. Three tRNA genes (for His, Lys, and Ile) are located in this region, and these are closely associated with one or the other of the elements, a phenomenon commonly observed in yeast. A comparison of c90 with corresponding regions from other strains shows that the locus is highly polymorphic and that this polymorphism is explicitly associated with Ty transposition and recombination events.

摘要

Ty4是酵母酿酒酵母中的一种新型转座元件,在基因组中仅存在少数几个拷贝(Stucka等人,1989年)。在C836菌株中,三个拷贝之一(Ty4-90)包含在黏粒克隆c90中,它位于第五条染色体上。对该区域的分析揭示了一个转座“热点”:除了Ty4-90之外,该位点还包含一个完整的Ty3元件以及七个单个的δ、σ和τ元件。三个tRNA基因(用于组氨酸、赖氨酸和异亮氨酸)位于该区域,并且它们与其中一个或另一个元件紧密相关,这是酵母中常见的现象。将c90与其他菌株的相应区域进行比较表明,该位点具有高度多态性,并且这种多态性与Ty转座和重组事件明确相关。

相似文献

1
A hot-spot for transposition of various Ty elements on chromosome V in Saccharomyces cerevisiae.酿酒酵母中位于第五条染色体上的各种Ty元件转座热点区域。
Curr Genet. 1989 Oct;16(4):247-52. doi: 10.1007/BF00422110.
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Ty4, a novel low-copy number element in Saccharomyces cerevisiae: one copy is located in a cluster of Ty elements and tRNA genes.Ty4,酿酒酵母中的一种新型低拷贝数元件:一个拷贝位于Ty元件和tRNA基因的簇中。
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Ty4, a new retrotransposon from Saccharomyces cerevisiae, flanked by tau-elements.Ty4是一种来自酿酒酵母的新型逆转座子,两侧为tau元件。
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Polymorphisms on the right arm of yeast chromosome III associated with Ty transposition and recombination events.酵母三号染色体右臂上与Ty转座和重组事件相关的多态性。
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Molecular analysis of the yeast Ty4 element: homology with Ty1, copia, and plant retrotransposons.酵母Ty4元件的分子分析:与Ty1、反转录转座子及植物反转录转座子的同源性
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Analysis of yeast chromosomal regions carrying members of the glutamate tRNA gene family: various transposable elements are associated with them.携带谷氨酸tRNA基因家族成员的酵母染色体区域分析:多种转座元件与它们相关联。
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Transposable elements and genome organization: a comprehensive survey of retrotransposons revealed by the complete Saccharomyces cerevisiae genome sequence.转座元件与基因组组织:通过酿酒酵母全基因组序列揭示的逆转座子综合调查
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引用本文的文献

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tRNA genes and retroelements in the yeast genome.酵母基因组中的转运RNA基因和反转录元件。
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2
Identification of new eukaryotic tRNA genes in genomic DNA databases by a multistep weight matrix analysis of transcriptional control regions.通过对转录控制区进行多步权重矩阵分析,在基因组DNA数据库中鉴定新的真核tRNA基因。
Nucleic Acids Res. 1994 Apr 11;22(7):1247-56. doi: 10.1093/nar/22.7.1247.
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The use of a synthetic tRNA gene as a novel approach to study in vivo transcription and chromatin structure in yeast.

本文引用的文献

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Delta sequences in the 5' non-coding region of yeast tRNA genes.酵母 tRNA 基因 5'非编码区中的德尔塔序列。
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The structure and coding specificity of a lysine transfer ribonucleic acid from the haploid yeast Saccharomyces cerevisiae alpha S288C.来自单倍体酵母酿酒酵母α S288C的赖氨酸转移核糖核酸的结构与编码特异性
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Concerted deletions and inversions are caused by mitotic recombination between delta sequences in Saccharomyces cerevisiae.协同缺失和倒位是由酿酒酵母中δ序列之间的有丝分裂重组引起的。
Mol Cell Biol. 1987 Mar;7(3):1198-207. doi: 10.1128/mcb.7.3.1198-1207.1987.
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Structure of the Saccharomyces cerevisiae gene encoding tRNAIle (IAU).酿酒酵母中编码异亮氨酸tRNA(IAU)的基因结构。
Nucleic Acids Res. 1987 Jan 12;15(1):364. doi: 10.1093/nar/15.1.364.