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本文引用的文献

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Breast density and mode of detection in relation to breast cancer specific survival: a cohort study.乳腺密度与乳腺癌特异性生存的关系:队列研究。
BMC Cancer. 2014 Mar 28;14:229. doi: 10.1186/1471-2407-14-229.
2
The Genotype-Tissue Expression (GTEx) project.基因型-组织表达 (GTEx) 项目。
Nat Genet. 2013 Jun;45(6):580-5. doi: 10.1038/ng.2653.
3
Mammographic breast density and subsequent risk of breast cancer in postmenopausal women according to the time since the mammogram.根据乳房 X 光检查后的时间,绝经后妇女的乳房密度与随后乳腺癌风险的关系。
Cancer Epidemiol Biomarkers Prev. 2013 Jun;22(6):1110-7. doi: 10.1158/1055-9965.EPI-13-0169. Epub 2013 Apr 19.
4
Mammographic density as a predictor of breast cancer survival: the Multiethnic Cohort.乳腺钼靶密度作为乳腺癌生存的预测指标:多民族队列研究
Breast Cancer Res. 2013 Jan 22;15(1):R7. doi: 10.1186/bcr3378.
5
Association analysis between breast cancer genetic variants and mammographic density in a large population-based study (Determinants of Density in Mammographies in Spain) identifies susceptibility loci in TOX3 gene.在一项大型基于人群的研究(西班牙乳腺摄影密度决定因素)中,对乳腺癌遗传变异与乳腺 X 线摄影密度之间的关联进行分析,确定了 TOX3 基因中的易感位点。
Eur J Cancer. 2013 Jan;49(2):474-81. doi: 10.1016/j.ejca.2012.08.026. Epub 2012 Sep 27.
6
A meta-analysis of genome-wide association studies of breast cancer identifies two novel susceptibility loci at 6q14 and 20q11.全基因组关联研究的荟萃分析确定了乳腺癌的两个新的易感位点,位于 6q14 和 20q11。
Hum Mol Genet. 2012 Dec 15;21(24):5373-84. doi: 10.1093/hmg/dds381. Epub 2012 Sep 13.
7
Annotation of functional variation in personal genomes using RegulomeDB.利用 RegulomeDB 注释个人基因组中的功能变异。
Genome Res. 2012 Sep;22(9):1790-7. doi: 10.1101/gr.137323.112.
8
Mapping cis- and trans-regulatory effects across multiple tissues in twins.在双胞胎的多个组织中映射顺式和反式调控作用。
Nat Genet. 2012 Oct;44(10):1084-9. doi: 10.1038/ng.2394. Epub 2012 Sep 2.
9
Relationship between mammographic density and breast cancer death in the Breast Cancer Surveillance Consortium.乳腺癌监测联盟中乳腺密度与乳腺癌死亡的关系。
J Natl Cancer Inst. 2012 Aug 22;104(16):1218-27. doi: 10.1093/jnci/djs327. Epub 2012 Aug 21.
10
The role of genetic breast cancer susceptibility variants as prognostic factors.遗传乳腺癌易感性变异作为预后因素的作用。
Hum Mol Genet. 2012 Sep 1;21(17):3926-39. doi: 10.1093/hmg/dds159. Epub 2012 Apr 24.

乳腺癌风险基因座与乳腺癌生存的关联。

Association of breast cancer risk loci with breast cancer survival.

作者信息

Barrdahl Myrto, Canzian Federico, Lindström Sara, Shui Irene, Black Amanda, Hoover Robert N, Ziegler Regina G, Buring Julie E, Chanock Stephen J, Diver W Ryan, Gapstur Susan M, Gaudet Mia M, Giles Graham G, Haiman Christopher, Henderson Brian E, Hankinson Susan, Hunter David J, Joshi Amit D, Kraft Peter, Lee I-Min, Le Marchand Loic, Milne Roger L, Southey Melissa C, Willett Walter, Gunter Marc, Panico Salvatore, Sund Malin, Weiderpass Elisabete, Sánchez María-José, Overvad Kim, Dossus Laure, Peeters Petra H, Khaw Kay-Tee, Trichopoulos Dimitrios, Kaaks Rudolf, Campa Daniele

机构信息

Division of Cancer Epidemiology, German Cancer Research Center (DKFZ), Heidelberg, Germany.

Genomic Epidemiology Group, German Cancer Research Center (DKFZ), Heidelberg, Germany.

出版信息

Int J Cancer. 2015 Dec 15;137(12):2837-45. doi: 10.1002/ijc.29446. Epub 2015 Aug 14.

DOI:10.1002/ijc.29446
PMID:25611573
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4615576/
Abstract

The survival of breast cancer patients is largely influenced by tumor characteristics, such as TNM stage, tumor grade and hormone receptor status. However, there is growing evidence that inherited genetic variation might affect the disease prognosis and response to treatment. Several lines of evidence suggest that alleles influencing breast cancer risk might also be associated with breast cancer survival. We examined the associations between 35 breast cancer susceptibility loci and the disease over-all survival (OS) in 10,255 breast cancer patients from the National Cancer Institute Breast and Prostate Cancer Cohort Consortium (BPC3) of which 1,379 died, including 754 of breast cancer. We also conducted a meta-analysis of almost 35,000 patients and 5,000 deaths, combining results from BPC3 and the Breast Cancer Association Consortium (BCAC) and performed in silico analyses of SNPs with significant associations. In BPC3, the C allele of LSP1-rs3817198 was significantly associated with improved OS (HRper-allele =0.70; 95% CI: 0.58-0.85; ptrend  = 2.84 × 10(-4) ; HRheterozygotes  = 0.71; 95% CI: 0.55-0.92; HRhomozygotes  = 0.48; 95% CI: 0.31-0.76; p2DF  = 1.45 × 10(-3) ). In silico, the C allele of LSP1-rs3817198 was predicted to increase expression of the tumor suppressor cyclin-dependent kinase inhibitor 1C (CDKN1C). In the meta-analysis, TNRC9-rs3803662 was significantly associated with increased death hazard (HRMETA =1.09; 95% CI: 1.04-1.15; ptrend  = 6.6 × 10(-4) ; HRheterozygotes  = 0.96 95% CI: 0.90-1.03; HRhomozygotes  = 1.21; 95% CI: 1.09-1.35; p2DF =1.25 × 10(-4) ). In conclusion, we show that there is little overlap between the breast cancer risk single nucleotide polymorphisms (SNPs) identified so far and the SNPs associated with breast cancer prognosis, with the possible exceptions of LSP1-rs3817198 and TNRC9-rs3803662.

摘要

乳腺癌患者的生存情况在很大程度上受肿瘤特征影响,如TNM分期、肿瘤分级和激素受体状态。然而,越来越多的证据表明,遗传基因变异可能会影响疾病预后和对治疗的反应。有几条证据表明,影响乳腺癌风险的等位基因可能也与乳腺癌生存相关。我们在来自美国国立癌症研究所乳腺癌和前列腺癌队列联盟(BPC3)的10255例乳腺癌患者中,研究了35个乳腺癌易感位点与疾病总生存(OS)之间的关联,其中1379例死亡,包括754例死于乳腺癌。我们还对近35000例患者和5000例死亡病例进行了荟萃分析,将BPC3和乳腺癌协会联盟(BCAC)的结果合并,并对具有显著关联的单核苷酸多态性(SNP)进行了计算机模拟分析。在BPC3中,LSP1-rs3817198的C等位基因与OS改善显著相关(每等位基因风险比=0.70;95%置信区间:0.58-0.85;趋势p=2.84×10⁻⁴;杂合子风险比=0.71;95%置信区间:0.55-0.92;纯合子风险比=0.48;95%置信区间:0.31-0.76;p₂DF=1.45×10⁻³)。在计算机模拟分析中,预测LSP1-rs3817198的C等位基因可增加肿瘤抑制因子细胞周期蛋白依赖性激酶抑制剂1C(CDKN1C)的表达。在荟萃分析中,TNRC9-rs3803662与死亡风险增加显著相关(荟萃分析风险比=1.09;95%置信区间:1.04-1.15;趋势p=6.6×10⁻⁴;杂合子风险比=0.96,95%置信区间:0.90-1.03;纯合子风险比=1.21;95%置信区间:1.09-1.35;p₂DF=1.25×10⁻⁴)。总之,我们表明,到目前为止所确定的乳腺癌风险单核苷酸多态性(SNP)与乳腺癌预后相关的SNP之间几乎没有重叠,LSP1-rs3817198和TNRC9-rs3803662可能为例外。