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为应对营养物质耗尽所做准备中的自然变异揭示了一种成本效益权衡。

Natural variation in preparation for nutrient depletion reveals a cost-benefit tradeoff.

作者信息

Wang Jue, Atolia Esha, Hua Bo, Savir Yonatan, Escalante-Chong Renan, Springer Michael

机构信息

Department of Systems Biology, Harvard Medical School, Boston, Massachusetts, United States of America; Systems Biology Graduate Program, Harvard University, Cambridge, Massachusetts, United States of America.

Department of Systems Biology, Harvard Medical School, Boston, Massachusetts, United States of America.

出版信息

PLoS Biol. 2015 Jan 27;13(1):e1002041. doi: 10.1371/journal.pbio.1002041. eCollection 2015 Jan.

Abstract

Maximizing growth and survival in the face of a complex, time-varying environment is a common problem for single-celled organisms in the wild. When offered two different sugars as carbon sources, microorganisms first consume the preferred sugar, then undergo a transient growth delay, the "diauxic lag," while inducing genes to metabolize the less preferred sugar. This delay is commonly assumed to be an inevitable consequence of selection to maximize use of the preferred sugar. Contrary to this view, we found that many natural isolates of Saccharomyces cerevisiae display short or nonexistent diauxic lags when grown in mixtures of glucose (preferred) and galactose. These strains induce galactose utilization (GAL) genes hours before glucose exhaustion, thereby "preparing" for the transition from glucose to galactose metabolism. The extent of preparation varies across strains, and seems to be determined by the steady-state response of GAL genes to mixtures of glucose and galactose rather than by induction kinetics. Although early GAL gene induction gives strains a competitive advantage once glucose runs out, it comes at a cost while glucose is still present. Costs and benefits correlate with the degree of preparation: strains with higher expression of GAL genes prior to glucose exhaustion experience a larger upfront growth cost but also a shorter diauxic lag. Our results show that classical diauxic growth is only one extreme on a continuum of growth strategies constrained by a cost-benefit tradeoff. This type of continuum is likely to be common in nature, as similar tradeoffs can arise whenever cells evolve to use mixtures of nutrients.

摘要

在复杂多变的环境中实现生长和生存最大化,是野生单细胞生物面临的一个常见问题。当提供两种不同的糖作为碳源时,微生物首先消耗偏好的糖,然后经历短暂的生长延迟,即“二次生长停滞”,同时诱导基因代谢不太偏好的糖。这种延迟通常被认为是为了最大化利用偏好的糖而进行选择的必然结果。与这种观点相反,我们发现许多酿酒酵母的自然分离株在葡萄糖(偏好的糖)和半乳糖的混合物中生长时,二次生长停滞很短或不存在。这些菌株在葡萄糖耗尽前数小时就诱导半乳糖利用(GAL)基因,从而为从葡萄糖代谢向半乳糖代谢的转变“做好准备”。准备的程度因菌株而异,似乎是由GAL基因对葡萄糖和半乳糖混合物的稳态反应决定的,而不是由诱导动力学决定。尽管早期诱导GAL基因在葡萄糖耗尽后会给菌株带来竞争优势,但在葡萄糖仍然存在时是有代价的。成本和收益与准备程度相关:在葡萄糖耗尽前GAL基因表达较高的菌株前期生长成本较大,但二次生长停滞也较短。我们的结果表明,经典的二次生长只是由成本效益权衡所限制的一系列生长策略中的一个极端情况。这种连续体在自然界可能很常见,因为每当细胞进化到利用营养混合物时,类似的权衡就可能出现。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b47c/4308108/efd02af25c7c/pbio.1002041.g001.jpg

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