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污染物诱导的线粒体DNA甲基化变化分析

Analysis of pollutant-induced changes in mitochondrial DNA methylation.

作者信息

Byun Hyang-Min, Barrow Timothy M

机构信息

Laboratory of Environmental Epigenetics, Exposure Epidemiology and Risk Program, Harvard School of Public Health, Boston, MA, USA,

出版信息

Methods Mol Biol. 2015;1265:271-83. doi: 10.1007/978-1-4939-2288-8_19.

Abstract

There is increasing evidence that exposure to air pollutants is associated with human disease and may act through epigenetic modification of the nuclear genome, but there have been few publications describing their impact upon the mitochondrial genome. Mitochondrial DNA may be more susceptible to pollutant-induced changes via increased oxidative stress in the cell, and therefore this field of research is of growing interest. Many techniques employed to study DNA methylation of the nuclear genome are also applicable to mitochondrial epigenetic studies. In this chapter, we describe a protocol for the isolation of mitochondrial DNA from peripheral blood samples and the analysis of 5-methylcytosine content by bisulfite pyrosequencing.

摘要

越来越多的证据表明,接触空气污染物与人类疾病有关,可能通过核基因组的表观遗传修饰起作用,但描述其对线粒体基因组影响的出版物却很少。线粒体DNA可能因细胞内氧化应激增加而更容易受到污染物诱导的变化影响,因此这一研究领域越来越受到关注。许多用于研究核基因组DNA甲基化的技术也适用于线粒体表观遗传研究。在本章中,我们描述了一种从外周血样本中分离线粒体DNA并通过亚硫酸氢盐焦磷酸测序分析5-甲基胞嘧啶含量的方法。

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