来自加拿大临床病例的四株副溶血性弧菌分离株的基因组序列草图
Draft Genome Sequences of Four Vibrio parahaemolyticus Isolates from Clinical Cases in Canada.
作者信息
Banerjee Swapan, Petronella Nicholas, Chew Leung Courtney, Farber Jeffrey
机构信息
Bureau of Microbial Hazards, Health Canada, Ottawa, Ontario, Canada
Bureau of Food Surveillance and Science Integration, Health Canada, Ottawa, Ontario, Canada.
出版信息
Genome Announc. 2015 Jan 29;3(1):e01482-14. doi: 10.1128/genomeA.01482-14.
Abstract
Vibrio parahaemolyticus is a leading cause of bacterial gastroenteritis following ingestion of contaminated seafood. This report presents the draft genome sequences of four clinical strains of V. parahaemolyticus isolated in Canada. All four strains lack traditional pathogenic markers and possess uniquely individual characteristics identified using other typing criteria.
摘要
副溶血性弧菌是摄入受污染海鲜后导致细菌性肠胃炎的主要病因。本报告展示了在加拿大分离出的四株副溶血性弧菌临床菌株的基因组序列草图。所有四株菌株均缺乏传统致病标志物，并具有使用其他分型标准鉴定出的独特个体特征。
相似文献
1
Draft Genome Sequences of Four Vibrio parahaemolyticus Isolates from Clinical Cases in Canada.
Genome Announc. 2015 Jan 29;3(1):e01482-14. doi: 10.1128/genomeA.01482-14.
2
Draft Genome Sequence of Vibrio parahaemolyticus SNUVpS-1 Isolated from Korean Seafood.
Genome Announc. 2013 Jan;1(1). doi: 10.1128/genomeA.00132-12. Epub 2013 Feb 7.
3
Draft Whole-Genome Sequences of 14 Vibrio parahaemolyticus Clinical Isolates with an Ambiguous K Serogroup.
Genome Announc. 2015 Apr 2;3(2):e00217-15. doi: 10.1128/genomeA.00217-15.
4
Draft Genome Sequences of Two Strains Associated with Gastroenteritis after Raw Seafood Ingestion in Colorado.
Genome Announc. 2018 Jan 18;6(3):e01387-17. doi: 10.1128/genomeA.01387-17.
5
A Novel Mouse Model of Enteric Vibrio parahaemolyticus Infection Reveals that the Type III Secretion System 2 Effector VopC Plays a Key Role in Tissue Invasion and Gastroenteritis.
mBio. 2019 Dec 17;10(6):e02608-19. doi: 10.1128/mBio.02608-19.
6
A Nonautochthonous U.S. Strain of Vibrio parahaemolyticus Isolated from Chesapeake Bay Oysters Caused the Outbreak in Maryland in 2010.
Appl Environ Microbiol. 2016 May 16;82(11):3208-3216. doi: 10.1128/AEM.00096-16. Print 2016 Jun 1.
7
Molecular typing of Vibrio parahaemolyticus isolates from the middle-east coastline of China.
Int J Food Microbiol. 2012 Feb 15;153(3):402-12. doi: 10.1016/j.ijfoodmicro.2011.12.001. Epub 2011 Dec 19.
8
Serology, virulence and molecular characteristics of Vibrio parahaemolyticus isolated from seafood in Zhejiang province.
PLoS One. 2018 Oct 4;13(10):e0204892. doi: 10.1371/journal.pone.0204892. eCollection 2018.
9
Presence of T3SS2β genes in trh⁺ Vibrio parahaemolyticus isolated from seafood harvested along Mangalore coast, India.
Lett Appl Microbiol. 2014 May;58(5):440-6. doi: 10.1111/lam.12210. Epub 2014 Jan 16.
10
Occurrence of pathogenic Vibrio parahaemolyticus in seafood distribution channels and their antibiotic resistance profiles in S. Korea.
Lett Appl Microbiol. 2019 Feb;68(2):128-133. doi: 10.1111/lam.13099. Epub 2019 Jan 4.
引用本文的文献
1
Gamma-Mobile-Trio systems are mobile elements rich in bacterial defensive and offensive tools.
Nat Microbiol. 2024 Dec;9(12):3268-3283. doi: 10.1038/s41564-024-01840-5. Epub 2024 Oct 23.
2
Engineering a customizable antibacterial T6SS-based platform in Vibrio natriegens.
EMBO Rep. 2021 Nov 4;22(11):e53681. doi: 10.15252/embr.202153681. Epub 2021 Sep 8.
3
The mechanisms that regulate Vibrio parahaemolyticus virulence gene expression differ between pathotypes.
Microb Genom. 2018 Jun;4(6). doi: 10.1099/mgen.0.000182. Epub 2018 May 29.
4
Environmental Conditions Associated with Elevated Vibrio parahaemolyticus Concentrations in Great Bay Estuary, New Hampshire.
PLoS One. 2016 May 4;11(5):e0155018. doi: 10.1371/journal.pone.0155018. eCollection 2016.
5
A Nonautochthonous U.S. Strain of Vibrio parahaemolyticus Isolated from Chesapeake Bay Oysters Caused the Outbreak in Maryland in 2010.
Appl Environ Microbiol. 2016 May 16;82(11):3208-3216. doi: 10.1128/AEM.00096-16. Print 2016 Jun 1.
6
Genomic Features of Environmental and Clinical Vibrio parahaemolyticus Isolates Lacking Recognized Virulence Factors Are Dissimilar.
Appl Environ Microbiol. 2015 Dec 4;82(4):1102-1113. doi: 10.1128/AEM.03465-15. Print 2016 Feb 15.
7
Transcriptional profiling of Vibrio parahaemolyticus exsA reveals a complex activation network for type III secretion.
Front Microbiol. 2015 Oct 20;6:1089. doi: 10.3389/fmicb.2015.01089. eCollection 2015.
本文引用的文献
1
Draft Genome Sequences of Two Clostridium botulinum Group II (Nonproteolytic) Type B Strains (DB-2 and KAPB-3).
Genome Announc. 2014 Nov 6;2(6):e01111-14. doi: 10.1128/genomeA.01111-14.
2
Draft Genome Sequence of Cronobacter sakazakii Clonal Complex 45 Strain HPB5174, Isolated from a Powdered Infant Formula Facility in Ireland.
Genome Announc. 2014 Aug 7;2(4):e00778-14. doi: 10.1128/genomeA.00778-14.
3
Phenotypic and genotypic characterization of Canadian clinical isolates of Vibrio parahaemolyticus collected from 2000 to 2009.
J Clin Microbiol. 2014 Apr;52(4):1081-8. doi: 10.1128/JCM.03047-13. Epub 2014 Jan 22.
4
Distribution and dynamics of epidemic and pandemic Vibrio parahaemolyticus virulence factors.
Front Cell Infect Microbiol. 2013 Dec 11;3:97. doi: 10.3389/fcimb.2013.00097. eCollection 2013.
5
Virulence determinants for Vibrio parahaemolyticus infection.
Curr Opin Microbiol. 2013 Feb;16(1):70-7. doi: 10.1016/j.mib.2013.02.002. Epub 2013 Feb 22.
6
BayesHammer: Bayesian clustering for error correction in single-cell sequencing.
BMC Genomics. 2013;14 Suppl 1(Suppl 1):S7. doi: 10.1186/1471-2164-14-S1-S7. Epub 2013 Jan 21.
7
Biochemical, serological, and virulence characterization of clinical and oyster Vibrio parahaemolyticus isolates.
J Clin Microbiol. 2012 Jul;50(7):2343-52. doi: 10.1128/JCM.00196-12. Epub 2012 Apr 25.
8
SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing.
J Comput Biol. 2012 May;19(5):455-77. doi: 10.1089/cmb.2012.0021. Epub 2012 Apr 16.
9
Comparative genomic analysis of Vibrio parahaemolyticus: serotype conversion and virulence.
BMC Genomics. 2011 Jun 6;12:294. doi: 10.1186/1471-2164-12-294.
10
Cholera and other types of vibriosis: a story of human pandemics and oysters on the half shell.
Clin Infect Dis. 2003 Jul 15;37(2):272-80. doi: 10.1086/375600. Epub 2003 Jul 3.
Zotero 插件