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从一名囊性纤维化患者体内相隔11个月分离出的两株潘多拉诺氏菌的基因组序列

Genome Sequences of Two Pandoraea pnomenusa Isolates Recovered 11 Months Apart from a Cystic Fibrosis Patient.

作者信息

Ee Robson, Ambrose Mark, Lazenby James, Williams Paul, Chan Kok-Gan, Roddam Louise

机构信息

Division of Genetics and Molecular Biology, Institute of Biological Sciences, Faculty of Science, University of Malaya, Kuala Lumpur, Malaysia.

School of Medicine, University of Tasmania, Tasmania, Australia.

出版信息

Genome Announc. 2015 Feb 5;3(1):e01389-14. doi: 10.1128/genomeA.01389-14.

DOI:10.1128/genomeA.01389-14
PMID:25657265
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4319598/
Abstract

Pandoraea is an emerging respiratory pathogen capable of causing chronic lung infections in people with cystic fibrosis (CF), but the clinical significance of this infection is ambiguous. We have sequenced and annotated the genomes of two multidrug-resistant Pandoraea pnomenusa isolates recovered 11 months apart from the same CF patient.

摘要

潘多拉菌是一种新出现的呼吸道病原体,能够在囊性纤维化(CF)患者中引起慢性肺部感染,但这种感染的临床意义尚不明确。我们对从同一CF患者体内相隔11个月分离出的两株耐多药潘多拉肺炎症病菌株的基因组进行了测序和注释。

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本文引用的文献

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De Novo Assembly of the Quorum-Sensing Pandoraea sp. Strain RB-44 Complete Genome Sequence Using PacBio Single-Molecule Real-Time Sequencing Technology.使用PacBio单分子实时测序技术对群体感应泛菌属RB-44菌株全基因组序列进行从头组装
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Clinical and microbiological features of a cystic fibrosis patient chronically colonized with Pandoraea sputorum identified by combining 16S rRNA sequencing and matrix-assisted laser desorption ionization-time of flight mass spectrometry.通过结合 16S rRNA 测序和基质辅助激光解吸电离飞行时间质谱技术鉴定的慢性定植于 Pandoraea sputorum 的囊性纤维化患者的临床和微生物特征。
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Introducing EzTaxon-e: a prokaryotic 16S rRNA gene sequence database with phylotypes that represent uncultured species.介绍 EzTaxon-e:一个具有代表未培养物种的分类群的细菌 16S rRNA 基因序列数据库。
Int J Syst Evol Microbiol. 2012 Mar;62(Pt 3):716-721. doi: 10.1099/ijs.0.038075-0. Epub 2011 Nov 25.
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MALDI-TOF MS improves routine identification of non-fermenting Gram negative isolates from cystic fibrosis patients.基质辅助激光解吸电离飞行时间质谱技术提高了囊性纤维化患者中非发酵革兰氏阴性菌的常规鉴定。
J Cyst Fibros. 2012 Jan;11(1):59-62. doi: 10.1016/j.jcf.2011.09.001. Epub 2011 Oct 2.
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