• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

拟态假单胞菌菌株2-36的基因组序列草图,该菌株是立枯丝核菌和禾顶囊壳菌的体外拮抗剂

Draft Genome Sequence of Pseudomonas simiae Strain 2-36, an In Vitro Antagonist of Rhizoctonia solani and Gaeumannomyces graminis.

作者信息

Adam Zaky, Chen Qing, Xu Renlin, Diange Adolf E, Bromfield Eden S P, Tambong James Tabi

机构信息

Biodiversity, Environmental Health Program, Agriculture and Agri-Food Canada, Ottawa, Ontario, Canada.

Biodiversity, Environmental Health Program, Agriculture and Agri-Food Canada, Ottawa, Ontario, Canada

出版信息

Genome Announc. 2015 Feb 5;3(1):e01534-14. doi: 10.1128/genomeA.01534-14.

DOI:10.1128/genomeA.01534-14
PMID:25657286
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4319604/
Abstract

Pseudomonas simiae 2-36, isolated from a field plot under long-term mineral fertilization, exhibited strong in vitro antagonistic activities against Rhizoctonia solani and Gaeumannomyces graminis. We report here the draft genome sequence of Pseudomonas simiae 2-36, consisting of 6.4 Mbp with a 60.25% G+C content and 5,790 predicted protein-coding sequences.

摘要

从长期施用矿物肥料的田间地块分离出的西米亚假单胞菌2-36,对立枯丝核菌和禾顶囊壳菌表现出很强的体外拮抗活性。我们在此报告西米亚假单胞菌2-36的基因组草图序列,其由640万个碱基对组成,G+C含量为60.25%,预测有5790个蛋白质编码序列。

相似文献

1
Draft Genome Sequence of Pseudomonas simiae Strain 2-36, an In Vitro Antagonist of Rhizoctonia solani and Gaeumannomyces graminis.拟态假单胞菌菌株2-36的基因组序列草图,该菌株是立枯丝核菌和禾顶囊壳菌的体外拮抗剂
Genome Announc. 2015 Feb 5;3(1):e01534-14. doi: 10.1128/genomeA.01534-14.
2
Draft Genome Sequence of Pseudomonas sp. Strain 2-92, a Biological Control Strain Isolated from a Field Plot Under Long-Term Mineral Fertilization.假单胞菌属菌株2-92的基因组草图序列,该菌株是从长期施用矿物肥料的田间地块分离得到的生物防治菌株。
Genome Announc. 2014 Jan 9;2(1):e01121-13. doi: 10.1128/genomeA.01121-13.
3
Draft genome sequence of the sugar beet pathogen Rhizoctonia solani AG2-2IIIB strain BBA69670.甜菜病原菌立枯丝核菌AG2-2IIIB菌株BBA69670的基因组序列草图
J Biotechnol. 2016 Mar 20;222:11-2. doi: 10.1016/j.jbiotec.2016.02.001. Epub 2016 Feb 3.
4
Draft Genome Sequences of Two Novel Pseudomonas Strains Exhibiting Differential Hypersensitivity Reactions on Tobacco and Corn Seedlings.两株对烟草和玉米幼苗表现出不同过敏反应的新型假单胞菌菌株的基因组序列草图
Genome Announc. 2016 Oct 6;4(5):e01057-16. doi: 10.1128/genomeA.01057-16.
5
Genome analysis of the sugar beet pathogen Rhizoctonia solani AG2-2IIIB revealed high numbers in secreted proteins and cell wall degrading enzymes.甜菜病原菌立枯丝核菌AG2-2IIIB的基因组分析显示,其分泌蛋白和细胞壁降解酶的数量众多。
BMC Genomics. 2016 Mar 17;17:245. doi: 10.1186/s12864-016-2561-1.
6
Draft Genome Sequence of Paenibacillus polymyxa 3A-25AI, a Strain Antagonist to Root Rot Causal Phytopathogens.多粘芽孢杆菌3A-25AI的基因组序列草图,该菌株是根腐病致病植物病原体的拮抗菌株
Microbiol Resour Announc. 2020 Feb 13;9(7):e01464-19. doi: 10.1128/MRA.01464-19.
7
Phylogenetic diversity and antagonistic traits of root and rhizosphere pseudomonads of bean from Iran for controlling Rhizoctonia solani.来自伊朗的菜豆根际及根际假单胞菌的系统发育多样性和拮抗特性对立枯丝核菌的控制作用
Res Microbiol. 2017 Oct;168(8):760-772. doi: 10.1016/j.resmic.2017.08.002. Epub 2017 Aug 26.
8
Production and Characterization of a Monoclonal Antibody Raised Against Surface Antigens from Mycelium of Gaeumannomyces graminis var. tritici: Evidence for an Extracellular Polyphenol Oxidase.针对小麦禾顶囊壳菌菌丝体表面抗原的单克隆抗体的制备和鉴定:一种细胞外多酚氧化酶的证据。
Phytopathology. 1997 Jan;87(1):123-31. doi: 10.1094/PHYTO.1997.87.1.123.
9
[Isolation and identification of a Bacillus amyloliquefaciens YB-3 against Rhizoctonia solani].[一株抗立枯丝核菌的解淀粉芽孢杆菌YB-3的分离与鉴定]
Wei Sheng Wu Xue Bao. 2011 Aug;51(8):1128-33.
10
Draft Genome Sequence of an Endophytic Fungus, sp. Strain JS-464, Isolated from a Reed Plant, .从芦苇植物(Phragmites australis)中分离得到的内生真菌Neofusicoccum sp.菌株JS-464的基因组序列草图
Genome Announc. 2017 Aug 3;5(31):e00734-17. doi: 10.1128/genomeA.00734-17.

引用本文的文献

1
Discovery of Phloeophagus Beetles as a Source of Strains That Produce Potentially New Bioactive Substances and Description of sp. nov.发现食木甲虫是产生潜在新型生物活性物质菌株的来源并对新物种进行描述
Front Microbiol. 2018 May 8;9:913. doi: 10.3389/fmicb.2018.00913. eCollection 2018.

本文引用的文献

1
antiSMASH 2.0--a versatile platform for genome mining of secondary metabolite producers.antiSMASH 2.0——一个用于次级代谢产物产生菌基因组挖掘的通用平台。
Nucleic Acids Res. 2013 Jul;41(Web Server issue):W204-12. doi: 10.1093/nar/gkt449. Epub 2013 Jun 3.
2
Toward almost closed genomes with GapFiller.使用 GapFiller 实现近乎闭合的基因组。
Genome Biol. 2012 Jun 25;13(6):R56. doi: 10.1186/gb-2012-13-6-r56.
3
Scaffolding pre-assembled contigs using SSPACE.使用 SSPACE 搭建预组装 contigs 的支架。
Bioinformatics. 2011 Feb 15;27(4):578-9. doi: 10.1093/bioinformatics/btq683. Epub 2010 Dec 12.
4
Reordering contigs of draft genomes using the Mauve aligner.使用 Mauve 比对工具重新排列草图基因组的顺序。
Bioinformatics. 2009 Aug 15;25(16):2071-3. doi: 10.1093/bioinformatics/btp356. Epub 2009 Jun 10.
5
ABySS: a parallel assembler for short read sequence data.ABySS:一种用于短读长序列数据的并行汇编器。
Genome Res. 2009 Jun;19(6):1117-23. doi: 10.1101/gr.089532.108. Epub 2009 Feb 27.
6
The RAST Server: rapid annotations using subsystems technology.RAST服务器:使用子系统技术进行快速注释。
BMC Genomics. 2008 Feb 8;9:75. doi: 10.1186/1471-2164-9-75.
7
RNAmmer: consistent and rapid annotation of ribosomal RNA genes.RNAmmer:核糖体RNA基因的一致性快速注释
Nucleic Acids Res. 2007;35(9):3100-8. doi: 10.1093/nar/gkm160. Epub 2007 Apr 22.
8
Improved microbial gene identification with GLIMMER.利用GLIMMER改进微生物基因识别。
Nucleic Acids Res. 1999 Dec 1;27(23):4636-41. doi: 10.1093/nar/27.23.4636.
9
tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence.tRNAscan-SE:用于改进基因组序列中转运RNA基因检测的程序。
Nucleic Acids Res. 1997 Mar 1;25(5):955-64. doi: 10.1093/nar/25.5.955.