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烃潮滩芽孢杆菌新属新种,一种从海边潮滩分离出的降解脂肪族烃类的细菌。

Aestuariicella hydrocarbonica gen. nov., sp. nov., an aliphatic hydrocarbon-degrading bacterium isolated from a sea tidal flat.

作者信息

Lo Naysim, Kim Kyung Hyun, Baek Kyunghwa, Jia Baolei, Jeon Che Ok

机构信息

Department of Life Science, Chung-Ang University, Seoul, 156-756, Republic of Korea.

出版信息

Int J Syst Evol Microbiol. 2015 Jun;65(Pt 6):1935-1940. doi: 10.1099/ijs.0.000199. Epub 2015 Mar 20.

Abstract

A Gram-staining-negative, strictly aerobic bacterial strain, designated SM-6T, was isolated from a sea tidal flat of the Dangjin bay, South Korea. Strain SM-6T was able to degrade a broad range of aliphatic hydrocarbons. Cells were catalase- and oxidase-positive and non-motile rods. Growth of strain SM-6T was observed at 10-37 °C (optimum, 20-25 °C), at pH 5.5-9.0 (optimum, pH 6.5-7.5) and in the presence of 0-10 % (w/v) NaCl (optimum, 2-3 %). The only isoprenoid quinone detected was ubiquinone-8 (Q-8). C17:1ω8c, C11:0 3-OH, summed feature 3 (comprising C16:1ω7c and/or C16:1ω6c), C9:0 3-OH and C10:0 3-OH were observed as the major cellular fatty acids and phosphatidylethanolamine, phosphatidylglycerol and four unidentified lipids were detected as polar lipids. The G+C content of the genomic DNA was 47.5 mol%. Strain SM-6T was most closely related to Pseudomaricurvus alkylphenolicus KU41GT (95.5 %), Maricurvus nonylphenolicus KU41ET (94.4 %) and Pseudoteredinibacter isoporae SW-11T (94.3 %), based on 16S rRNA gene sequences, and phylogenetic analyses showed that strain SM-6T formed a phyletic lineage distinct from the closely related genera. On the basis of phenotypic, chemotaxonomic and molecular features, strain SM-6T represents a novel genus and species of the order Alteromonadales in the class Gammaproteobacteria, for which name Aestuariicella hydrocarbonica gen. nov., sp. nov. is proposed. The type strain is SM-6T ( = KACC 18121T = JCM 30134T).

摘要

从韩国唐津湾的一个海潮滩涂中分离出一株革兰氏染色阴性、严格需氧的细菌菌株,命名为SM-6T。菌株SM-6T能够降解多种脂肪族烃类。细胞过氧化氢酶和氧化酶呈阳性,为不运动的杆菌。在10-37℃(最适温度为20-25℃)、pH 5.5-9.0(最适pH为6.5-7.5)以及0-10%(w/v)NaCl(最适浓度为2-3%)的条件下观察到菌株SM-6T生长。检测到的唯一类异戊二烯醌为泛醌-8(Q-8)。主要细胞脂肪酸为C17:1ω8c、C11:0 3-OH、总和特征3(包含C16:1ω7c和/或C16:1ω6c)、C9:0 3-OH和C10:0 3-OH,极性脂质检测到磷脂酰乙醇胺、磷脂酰甘油和四种未鉴定的脂质。基因组DNA的G+C含量为47.5 mol%。基于16S rRNA基因序列分析,菌株SM-6T与烷基酚假海弯菌KU41GT(95.5%)、壬基酚海弯菌KU41ET(94.4%)和等孢拟木蠹杆菌SW-11T(94.3%)关系最为密切,系统发育分析表明菌株SM-6T形成了一个与相近相关属不同的进化谱系。基于表型、化学分类和分子特征,菌株SM-6T代表γ-变形菌纲交替单胞菌目中的一个新属新种,为此提出新属名为烃河口菌属(Aestuariicella),新种名为烃河口菌(Aestuariicella hydrocarbonica)。模式菌株为SM-6T(=KACC 18121T =JCM 3

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