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小GTP酶K-Ras4B法尼基化高变区的膜结合机制

Mechanisms of membrane binding of small GTPase K-Ras4B farnesylated hypervariable region.

作者信息

Jang Hyunbum, Abraham Sherwin J, Chavan Tanmay S, Hitchinson Ben, Khavrutskii Lyuba, Tarasova Nadya I, Nussinov Ruth, Gaponenko Vadim

机构信息

From the Basic Science Program, Leidos Biomedical Research, Inc., Frederick National Laboratory for Cancer Research and Cancer and Inflammation Program, NCI-Frederick, National Institutes of Health, Frederick, Maryland 21702.

Department of Molecular and Cellular Physiology, Stanford University, Stanford, California 94305, Departments of Biochemistry and Molecular Genetics and.

出版信息

J Biol Chem. 2015 Apr 10;290(15):9465-77. doi: 10.1074/jbc.M114.620724. Epub 2015 Feb 24.

Abstract

K-Ras4B belongs to a family of small GTPases that regulates cell growth, differentiation and survival. K-ras is frequently mutated in cancer. K-Ras4B association with the plasma membrane through its farnesylated and positively charged C-terminal hypervariable region (HVR) is critical to its oncogenic function. However, the structural mechanisms of membrane association are not fully understood. Here, using confocal microscopy, surface plasmon resonance, and molecular dynamics simulations, we observed that K-Ras4B can be distributed in rigid and loosely packed membrane domains. Its membrane binding domain interaction with phospholipids is driven by membrane fluidity. The farnesyl group spontaneously inserts into the disordered lipid microdomains, whereas the rigid microdomains restrict the farnesyl group penetration. We speculate that the resulting farnesyl protrusion toward the cell interior allows oligomerization of the K-Ras4B membrane binding domain in rigid microdomains. Unlike other Ras isoforms, K-Ras4B HVR contains a single farnesyl modification and positively charged polylysine sequence. The high positive charge not only modulates specific HVR binding to anionic phospholipids but farnesyl membrane orientation. Phosphorylation of Ser-181 prohibits spontaneous farnesyl membrane insertion. The mechanism illuminates the roles of HVR modifications in K-Ras4B targeting microdomains of the plasma membrane and suggests an additional function for HVR in regulation of Ras signaling.

摘要

K-Ras4B属于一类小GTP酶家族,该家族调节细胞生长、分化和存活。K-ras在癌症中经常发生突变。K-Ras4B通过其法尼基化且带正电荷的C末端高变区(HVR)与质膜结合,这对其致癌功能至关重要。然而,膜结合的结构机制尚未完全了解。在这里,我们使用共聚焦显微镜、表面等离子体共振和分子动力学模拟观察到,K-Ras4B可以分布在刚性和松散堆积的膜结构域中。其膜结合结构域与磷脂的相互作用由膜流动性驱动。法尼基基团自发插入无序脂质微结构域,而刚性微结构域限制法尼基基团的渗透。我们推测,由此产生的法尼基基团向细胞内部的突出允许K-Ras4B膜结合结构域在刚性微结构域中发生寡聚化。与其他Ras亚型不同,K-Ras4B的HVR包含单个法尼基修饰和带正电荷的多聚赖氨酸序列。高正电荷不仅调节HVR与阴离子磷脂的特异性结合,还调节法尼基在膜上的取向。Ser-181的磷酸化阻止法尼基自发插入膜中。该机制阐明了HVR修饰在K-Ras4B靶向质膜微结构域中的作用,并提示了HVR在调节Ras信号传导中的额外功能。

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