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平行代谢和转录组数据的网络整合揭示了调节巨噬细胞极化的代谢模块。

Network integration of parallel metabolic and transcriptional data reveals metabolic modules that regulate macrophage polarization.

机构信息

Agios Pharmaceuticals, 38 Sidney Street, Cambridge, MA 02139, USA.

Department of Pathology & Immunology, Washington University in St. Louis, 660 S. Euclid Avenue, St. Louis, MO 63110, USA.

出版信息

Immunity. 2015 Mar 17;42(3):419-30. doi: 10.1016/j.immuni.2015.02.005.

DOI:10.1016/j.immuni.2015.02.005
PMID:25786174
Abstract

Macrophage polarization involves a coordinated metabolic and transcriptional rewiring that is only partially understood. By using an integrated high-throughput transcriptional-metabolic profiling and analysis pipeline, we characterized systemic changes during murine macrophage M1 and M2 polarization. M2 polarization was found to activate glutamine catabolism and UDP-GlcNAc-associated modules. Correspondingly, glutamine deprivation or inhibition of N-glycosylation decreased M2 polarization and production of chemokine CCL22. In M1 macrophages, we identified a metabolic break at Idh, the enzyme that converts isocitrate to alpha-ketoglutarate, providing mechanistic explanation for TCA cycle fragmentation. (13)C-tracer studies suggested the presence of an active variant of the aspartate-arginosuccinate shunt that compensated for this break. Consistently, inhibition of aspartate-aminotransferase, a key enzyme of the shunt, inhibited nitric oxide and interleukin-6 production in M1 macrophages, while promoting mitochondrial respiration. This systems approach provides a highly integrated picture of the physiological modules supporting macrophage polarization, identifying potential pharmacologic control points for both macrophage phenotypes.

摘要

巨噬细胞极化涉及协调的代谢和转录重编程,目前仅部分了解。通过使用集成的高通量转录代谢谱分析和分析管道,我们描述了在小鼠巨噬细胞 M1 和 M2 极化过程中的系统变化。发现 M2 极化激活谷氨酰胺分解代谢和 UDP-GlcNAc 相关模块。相应地,谷氨酰胺剥夺或 N-糖基化抑制降低了 M2 极化和趋化因子 CCL22 的产生。在 M1 巨噬细胞中,我们在将异柠檬酸转化为α-酮戊二酸的酶 IDH 处发现了代谢断裂,为 TCA 循环碎裂提供了机制解释。(13)C 示踪研究表明存在活跃的天冬氨酸-精氨酸穿梭变体,可补偿这种断裂。一致地,天冬氨酸转氨酶的抑制,穿梭的关键酶,抑制了 M1 巨噬细胞中一氧化氮和白细胞介素-6 的产生,同时促进了线粒体呼吸。这种系统方法提供了支持巨噬细胞极化的生理模块的高度综合图景,确定了两种巨噬细胞表型的潜在药理控制点。

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