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Transient electrostatic interactions dominate the conformational equilibrium sampled by multidomain splicing factor U2AF65: a combined NMR and SAXS study.瞬态静电相互作用主导多结构域剪接因子 U2AF65 构象平衡的采样:NMR 和 SAXS 的联合研究。
J Am Chem Soc. 2014 May 14;136(19):7068-76. doi: 10.1021/ja502030n. Epub 2014 Apr 29.
2
Structural basis for the electron transfer from an open form of NADPH-cytochrome P450 oxidoreductase to heme oxygenase.NADPH-细胞色素 P450 氧化还原酶开型向血红素加氧酶电子转移的结构基础。
Proc Natl Acad Sci U S A. 2014 Feb 18;111(7):2524-9. doi: 10.1073/pnas.1322034111. Epub 2014 Feb 3.
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Single molecule activity measurements of cytochrome P450 oxidoreductase reveal the existence of two discrete functional states.细胞色素 P450 氧化还原酶的单分子活性测量揭示了两种离散功能状态的存在。
ACS Chem Biol. 2014 Mar 21;9(3):630-4. doi: 10.1021/cb400708v. Epub 2014 Jan 17.
4
Recovering a representative conformational ensemble from underdetermined macromolecular structural data.从不完整的大分子结构数据中恢复具有代表性的构象集合。
J Am Chem Soc. 2013 Nov 6;135(44):16595-609. doi: 10.1021/ja4083717.
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Structure and dynamics of full-length HIV-1 capsid protein in solution.全长 HIV-1 衣壳蛋白在溶液中的结构与动力学。
J Am Chem Soc. 2013 Oct 30;135(43):16133-47. doi: 10.1021/ja406246z. Epub 2013 Oct 17.
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Redox-linked domain movements in the catalytic cycle of cytochrome p450 reductase.细胞色素 p450 还原酶催化循环中的氧化还原相关结构域运动。
Structure. 2013 Sep 3;21(9):1581-9. doi: 10.1016/j.str.2013.06.022. Epub 2013 Aug 1.
7
Charge-pairing interactions control the conformational setpoint and motions of the FMN domain in neuronal nitric oxide synthase.电荷对相互作用控制神经元型一氧化氮合酶中 FMN 结构域的构象设定点和运动。
Biochem J. 2013 Mar 15;450(3):607-17. doi: 10.1042/BJ20121488.
8
Dynamic control of electron transfers in diflavin reductases.双黄素还原酶中电子转移的动态控制
Int J Mol Sci. 2012 Nov 15;13(11):15012-41. doi: 10.3390/ijms131115012.
9
Electrostatic optimization of the conformational energy landscape in a metamorphic protein.静电优化构象能景观在一个变形蛋白。
Biochemistry. 2012 Nov 13;51(45):9067-75. doi: 10.1021/bi300842j. Epub 2012 Nov 2.
10
Advances in X-ray scattering: from solution SAXS to achievements with coherent beams.X 射线散射的进展:从溶液 SAXS 到相干光束的成就。
Curr Opin Struct Biol. 2012 Oct;22(5):670-8. doi: 10.1016/j.sbi.2012.07.014. Epub 2012 Sep 3.

一种平衡良好的预先存在的平衡状态控制着多结构域双黄素还原酶的电子通量效率。

A well-balanced preexisting equilibrium governs electron flux efficiency of a multidomain diflavin reductase.

作者信息

Frances Oriane, Fatemi Fataneh, Pompon Denis, Guittet Eric, Sizun Christina, Pérez Javier, Lescop Ewen, Truan Gilles

机构信息

Institut de Chimie des Substances Naturelles, CNRS, UPR 2301, Centre de Recherche de Gif, Gif-sur-Yvette, France.

Université de Toulouse, INSA, UPS, INP, LISBP, Toulouse, France; INRA, UMR792 Ingénierie des Systèmes Biologiques et des Procédés, Toulouse, France; CNRS, UMR5504, Toulouse, France.

出版信息

Biophys J. 2015 Mar 24;108(6):1527-1536. doi: 10.1016/j.bpj.2015.01.032.

DOI:10.1016/j.bpj.2015.01.032
PMID:25809265
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4375552/
Abstract

Diflavin reductases are bidomain electron transfer proteins in which structural reorientation is necessary to account for the various intramolecular and intermolecular electron transfer steps. Using small-angle x-ray scattering and nuclear magnetic resonance data, we describe the conformational free-energy landscape of the NADPH-cytochrome P450 reductase (CPR), a typical bidomain redox enzyme composed of two covalently-bound flavin domains, under various experimental conditions. The CPR enzyme exists in a salt- and pH-dependent rapid equilibrium between a previously described rigid, locked state and a newly characterized, highly flexible, unlocked state. We further establish that maximal electron flux through CPR is conditioned by adjustable stability of the locked-state domain interface under resting conditions. This is rationalized by a kinetic scheme coupling rapid conformational sampling and slow chemical reaction rates. Regulated domain interface stability associated with fast stochastic domain contacts during the catalytic cycle thus provides, to our knowledge, a new paradigm for improving our understanding of multidomain enzyme function.

摘要

双黄素还原酶是双结构域电子转移蛋白,其中结构重排对于解释各种分子内和分子间电子转移步骤是必要的。利用小角X射线散射和核磁共振数据,我们描述了NADPH-细胞色素P450还原酶(CPR)在各种实验条件下的构象自由能景观,CPR是一种典型的双结构域氧化还原酶,由两个共价结合的黄素结构域组成。CPR酶在先前描述的刚性、锁定状态和新表征的高度灵活、未锁定状态之间存在盐和pH依赖性的快速平衡。我们进一步确定,静息条件下通过CPR的最大电子通量受锁定状态结构域界面可调节稳定性的制约。这通过将快速构象采样和缓慢化学反应速率耦合的动力学方案得到合理解释。因此,据我们所知,与催化循环中快速随机结构域接触相关的受调节结构域界面稳定性为增进我们对多结构域酶功能的理解提供了一个新范例。