• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

在一族镍超氧化物歧化酶(NiSOD)的镍-二氮二硫(Ni-N2S2)合成模型中探究镍(III)-硫醇盐与镍(II)-硫自由基键合情况。

Accessing Ni(III)-thiolate versus Ni(II)-thiyl bonding in a family of Ni-N2S2 synthetic models of NiSOD.

作者信息

Broering Ellen P, Dillon Stephanie, Gale Eric M, Steiner Ramsey A, Telser Joshua, Brunold Thomas C, Harrop Todd C

机构信息

†Department of Chemistry and Center for Metalloenzyme Studies, The University of Georgia, 1001 Cedar Street, Athens, Georgia 30602, United States.

‡Department of Chemistry, University of Wisconsin, Madison, Wisconsin 53706, United States.

出版信息

Inorg Chem. 2015 Apr 20;54(8):3815-28. doi: 10.1021/ic503124f. Epub 2015 Apr 2.

DOI:10.1021/ic503124f
PMID:25835183
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4630978/
Abstract

Superoxide dismutase (SOD) catalyzes the disproportionation of superoxide (O2(• -)) into H2O2 and O2(g) by toggling through different oxidation states of a first-row transition metal ion at its active site. Ni-containing SODs (NiSODs) are a distinct class of this family of metalloenzymes due to the unusual coordination sphere that is comprised of mixed N/S-ligands from peptide-N and cysteine-S donor atoms. A central goal of our research is to understand the factors that govern reactive oxygen species (ROS) stability of the Ni-S(Cys) bond in NiSOD utilizing a synthetic model approach. In light of the reactivity of metal-coordinated thiolates to ROS, several hypotheses have been proffered and include the coordination of His1-Nδ to the Ni(II) and Ni(III) forms of NiSOD, as well as hydrogen bonding or full protonation of a coordinated S(Cys). In this work, we present NiSOD analogues of the general formula Ni(N2S)(SR'), providing a variable location (SR' = aryl thiolate) in the N2S2 basal plane coordination sphere where we have introduced o-amino and/or electron-withdrawing groups to intercept an oxidized Ni species. The synthesis, structure, and properties of the NiSOD model complexes (Et4N)[Ni(nmp)(SPh-o-NH2)] (2), (Et4N)[Ni(nmp)(SPh-o-NH2-p-CF3)] (3), (Et4N)[Ni(nmp)(SPh-p-NH2)] (4), and (Et4N)[Ni(nmp)(SPh-p-CF3)] (5) (nmp(2-) = dianion of N-(2-mercaptoethyl)picolinamide) are reported. NiSOD model complexes with amino groups positioned ortho to the aryl-S in SR' (2 and 3) afford oxidized species (2(ox) and 3(ox)) that are best described as a resonance hybrid between Ni(III)-SR and Ni(II)-(•)SR based on ultraviolet-visible (UV-vis), magnetic circular dichroism (MCD), and electron paramagnetic resonance (EPR) spectroscopies, as well as density functional theory (DFT) calculations. The results presented here, demonstrating the high percentage of S(3p) character in the highest occupied molecular orbital (HOMO) of the four-coordinate reduced form of NiSOD (NiSODred), suggest that the transition from NiSODred to the five-coordinate oxidized form of NiSOD (NiSODox) may go through a four-coordinate Ni-(•)S(Cys) (NiSODox-Hisoff) that is stabilized by coordination to Ni(II).

摘要

超氧化物歧化酶(SOD)通过在其活性位点切换第一排过渡金属离子的不同氧化态,催化超氧化物(O2(• -))歧化为H2O2和O2(g)。含镍超氧化物歧化酶(NiSODs)是这类金属酶中的一个独特类别,因为其具有不寻常的配位环境,该环境由来自肽 - N和半胱氨酸 - S供体原子的混合N/S配体组成。我们研究的一个核心目标是利用合成模型方法来理解控制NiSOD中Ni - S(半胱氨酸)键的活性氧(ROS)稳定性的因素。鉴于金属配位硫醇盐对ROS的反应性,已经提出了几种假设,包括His1 - Nδ与NiSOD的Ni(II)和Ni(III)形式的配位,以及配位的S(半胱氨酸)的氢键作用或完全质子化。在这项工作中,我们展示了通式为Ni(N2S)(SR')的NiSOD类似物,在N2S2基面配位环境中提供了一个可变位置(SR' = 芳基硫醇盐),我们在其中引入了邻氨基和/或吸电子基团以捕获氧化态的Ni物种。报道了NiSOD模型配合物(Et4N)[Ni(nmp)(SPh - o - NH2)](2)、(Et4N)[Ni(nmp)(SPh - o - NH2 - p - CF3)](3)、(Et4N)[Ni(nmp)(SPh - p - NH2)](4)和(Et4N)[Ni(nmp)(SPh - p - CF3)](5)(nmp(2-) = N - (2 - 巯基乙基)吡啶酰胺的二价阴离子)的合成、结构和性质。在SR'中芳基 - S的邻位带有氨基的NiSOD模型配合物(2和3)产生的氧化物种(2(ox)和3(ox)),根据紫外 - 可见(UV - vis)、磁圆二色性(MCD)和电子顺磁共振(EPR)光谱以及密度泛函理论(DFT)计算,最好描述为Ni(III) - SR和Ni(II) - (•)SR之间的共振杂化体。此处给出的结果表明,在四配位还原形式的NiSOD(NiSODred)的最高占据分子轨道(HOMO)中S(3p)特征的高比例,这表明从NiSODred到五配位氧化形式的NiSOD(NiSODox)的转变可能通过与Ni(II)配位而稳定的四配位Ni - (•)S(半胱氨酸)(NiSODox - Hisoff)进行。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e049/4630978/0dac6f85478a/nihms-704449-f0015.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e049/4630978/5353cae23064/nihms-704449-f0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e049/4630978/fd5ff3778a89/nihms-704449-f0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e049/4630978/fa7cba85a379/nihms-704449-f0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e049/4630978/4ce6f05c473c/nihms-704449-f0006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e049/4630978/2ce2be878c70/nihms-704449-f0007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e049/4630978/dd405edfc607/nihms-704449-f0008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e049/4630978/c9a8289ee1b7/nihms-704449-f0009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e049/4630978/cb62cea0665e/nihms-704449-f0011.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e049/4630978/dfdb2b7bd9b2/nihms-704449-f0012.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e049/4630978/bbb553c609ac/nihms-704449-f0013.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e049/4630978/4617e4243663/nihms-704449-f0014.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e049/4630978/53dbf5b2c695/nihms-704449-f0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e049/4630978/3cc3d5a7bd8a/nihms-704449-f0010.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e049/4630978/0dac6f85478a/nihms-704449-f0015.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e049/4630978/5353cae23064/nihms-704449-f0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e049/4630978/fd5ff3778a89/nihms-704449-f0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e049/4630978/fa7cba85a379/nihms-704449-f0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e049/4630978/4ce6f05c473c/nihms-704449-f0006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e049/4630978/2ce2be878c70/nihms-704449-f0007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e049/4630978/dd405edfc607/nihms-704449-f0008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e049/4630978/c9a8289ee1b7/nihms-704449-f0009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e049/4630978/cb62cea0665e/nihms-704449-f0011.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e049/4630978/dfdb2b7bd9b2/nihms-704449-f0012.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e049/4630978/bbb553c609ac/nihms-704449-f0013.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e049/4630978/4617e4243663/nihms-704449-f0014.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e049/4630978/53dbf5b2c695/nihms-704449-f0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e049/4630978/3cc3d5a7bd8a/nihms-704449-f0010.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e049/4630978/0dac6f85478a/nihms-704449-f0015.jpg

相似文献

1
Accessing Ni(III)-thiolate versus Ni(II)-thiyl bonding in a family of Ni-N2S2 synthetic models of NiSOD.在一族镍超氧化物歧化酶(NiSOD)的镍-二氮二硫(Ni-N2S2)合成模型中探究镍(III)-硫醇盐与镍(II)-硫自由基键合情况。
Inorg Chem. 2015 Apr 20;54(8):3815-28. doi: 10.1021/ic503124f. Epub 2015 Apr 2.
2
Exploring the effects of H-bonding in synthetic analogues of nickel superoxide dismutase (Ni-SOD): experimental and theoretical implications for protection of the Ni-SCys bond.探索氢键在镍超氧化物歧化酶(Ni-SOD)合成类似物中的作用:对 Ni-SCys 键保护的实验和理论意义。
Inorg Chem. 2010 Aug 2;49(15):7080-96. doi: 10.1021/ic1009187.
3
Cysteinate protonation and water hydrogen bonding at the active-site of a nickel superoxide dismutase metallopeptide-based mimic: implications for the mechanism of superoxide reduction.半胱氨酸质子化和水的氢键在镍超氧化物歧化酶金属肽模拟物的活性部位:对超氧化物还原机制的影响。
J Am Chem Soc. 2014 Nov 12;136(45):16009-22. doi: 10.1021/ja5079514. Epub 2014 Nov 3.
4
Simultaneous nitrosylation and N-nitrosation of a Ni-thiolate model complex of Ni-containing SOD.含镍超氧化物歧化酶的硫醇盐镍模型配合物的同步亚硝化和N-亚硝化反应
Chem Sci. 2018 Sep 17;9(45):8567-8574. doi: 10.1039/c8sc03321h. eCollection 2018 Dec 7.
5
Insight into the structure and mechanism of nickel-containing superoxide dismutase derived from peptide-based mimics.基于肽模拟物的镍超氧化物歧化酶结构与机制的研究进展。
Acc Chem Res. 2014 Aug 19;47(8):2332-41. doi: 10.1021/ar500060s. Epub 2014 May 13.
6
Probing variable amine/amide ligation in Ni(II)N2S2 complexes using sulfur K-edge and nickel L-edge X-ray absorption spectroscopies: implications for the active site of nickel superoxide dismutase.利用硫 K 边和镍 L 边 X 射线吸收光谱探究 Ni(II)N2S2 配合物中的可变胺/酰胺连接:对镍超氧化物歧化酶活性位点的启示
Inorg Chem. 2008 Apr 7;47(7):2649-60. doi: 10.1021/ic7019878. Epub 2008 Mar 11.
7
Stabilization of the Nickel Binding Loop in NiSOD and Related Model Complexes: Thermodynamic and Structural Features.镍结合环在 NiSOD 及相关模型复合物中的稳定性:热力学和结构特征。
Inorg Chem. 2019 Jan 22;58(2):1414-1424. doi: 10.1021/acs.inorgchem.8b02952. Epub 2019 Jan 8.
8
Steric Enforcement about One Thiolate Donor Leads to New Oxidation Chemistry in a NiSOD Model Complex.围绕一个硫醇盐供体的空间效应导致镍超氧化物歧化酶模型配合物中出现新的氧化化学。
Inorg Chem. 2017 Jul 17;56(14):7761-7780. doi: 10.1021/acs.inorgchem.7b00485. Epub 2017 May 1.
9
Spectroscopic and computational studies of Ni superoxide dismutase: electronic structure contributions to enzymatic function.镍超氧化物歧化酶的光谱和计算研究:电子结构对酶功能的贡献。
J Am Chem Soc. 2005 Apr 20;127(15):5449-62. doi: 10.1021/ja042521i.
10
The Role of Mixed Amine/Amide Ligation in Nickel Superoxide Dismutase.混合胺/酰胺连接在镍超氧化物歧化酶中的作用。
Inorg Chem. 2018 Oct 15;57(20):12521-12535. doi: 10.1021/acs.inorgchem.8b01499. Epub 2018 Oct 3.

引用本文的文献

1
Cooperative Sulfur Transformations at a Dinickel Site: A Metal Bridging Sulfur Radical and Its H-Atom Abstraction Thermochemistry.二镍位点处的协同硫转化:金属桥连硫自由基及其氢原子转移热化学
J Am Chem Soc. 2024 Aug 21;146(33):23158-23170. doi: 10.1021/jacs.4c05113. Epub 2024 Aug 7.
2
Proton-Coupled Electron-Transfer Reactivity Controls Iron versus Sulfur Oxidation in Nonheme Iron-Thiolate Complexes.质子耦合电子转移反应性控制非血红素铁-硫醇配合物中铁与硫的氧化。
Inorg Chem. 2021 May 3;60(9):6255-6265. doi: 10.1021/acs.inorgchem.0c03779. Epub 2021 Apr 19.
3
Simultaneous nitrosylation and N-nitrosation of a Ni-thiolate model complex of Ni-containing SOD.

本文引用的文献

1
First Isolation and Structural Characterization of a Nickel(III) Complex Containing Aliphatic Thiolate Donors.含脂肪族硫醇盐供体的镍(III)配合物的首次分离及结构表征
Angew Chem Int Ed Engl. 1998 Feb 16;37(3):360-363. doi: 10.1002/(SICI)1521-3773(19980216)37:3<360::AID-ANIE360>3.0.CO;2-P.
2
Advanced paramagnetic resonance spectroscopies of iron-sulfur proteins: Electron nuclear double resonance (ENDOR) and electron spin echo envelope modulation (ESEEM).铁硫蛋白的高级顺磁共振波谱学:电子核双共振(ENDOR)和电子自旋回波包络调制(ESEEM)。
Biochim Biophys Acta. 2015 Jun;1853(6):1370-94. doi: 10.1016/j.bbamcr.2015.01.025. Epub 2015 Feb 14.
3
含镍超氧化物歧化酶的硫醇盐镍模型配合物的同步亚硝化和N-亚硝化反应
Chem Sci. 2018 Sep 17;9(45):8567-8574. doi: 10.1039/c8sc03321h. eCollection 2018 Dec 7.
4
An S = / Iron Complex Featuring N, Thiolate, and Hydride Ligands: Reductive Elimination of H and Relevant Thermochemical Fe-H Parameters.一种 S=/铁配合物,具有 N、硫醇和氢化物配体:H 的还原消除及相关的热化学 Fe-H 参数。
J Am Chem Soc. 2018 May 23;140(20):6374-6382. doi: 10.1021/jacs.8b02603. Epub 2018 May 10.
5
How Do Ring Size and π-Donating Thiolate Ligands Affect Redox-Active, α-Imino-N-heterocycle Ligand Activation?戒指尺寸和给π电子的硫醇盐配体如何影响氧化还原活性α-亚氨基氮杂环配体的活化?
Inorg Chem. 2018 Feb 19;57(4):1935-1949. doi: 10.1021/acs.inorgchem.7b02748. Epub 2018 Feb 7.
6
New insights into the mechanism of nickel superoxide degradation from studies of model peptides.从模型肽研究中对镍过氧化物降解机制的新认识。
Sci Rep. 2017 Dec 8;7(1):17194. doi: 10.1038/s41598-017-17446-3.
7
Design and reactivity of Ni-complexes using pentadentate neutral-polypyridyl ligands: Possible mimics of NiSOD.使用五齿中性多吡啶配体的镍配合物的设计与反应活性:镍超氧化物歧化酶的可能模拟物
J Inorg Biochem. 2017 Oct;175:110-117. doi: 10.1016/j.jinorgbio.2017.07.005. Epub 2017 Jul 6.
Nickel superoxide dismutase: structural and functional roles of His1 and its H-bonding network.
镍超氧化物歧化酶:组氨酸1的结构和功能作用及其氢键网络
Biochemistry. 2015 Feb 3;54(4):1016-27. doi: 10.1021/bi501258u. Epub 2015 Jan 21.
4
Cysteinate protonation and water hydrogen bonding at the active-site of a nickel superoxide dismutase metallopeptide-based mimic: implications for the mechanism of superoxide reduction.半胱氨酸质子化和水的氢键在镍超氧化物歧化酶金属肽模拟物的活性部位:对超氧化物还原机制的影响。
J Am Chem Soc. 2014 Nov 12;136(45):16009-22. doi: 10.1021/ja5079514. Epub 2014 Nov 3.
5
Recent advances in radical SAM enzymology: new structures and mechanisms.自由基S-腺苷甲硫氨酸酶学的最新进展:新结构与机制
ACS Chem Biol. 2014 Sep 19;9(9):1929-38. doi: 10.1021/cb5004674. Epub 2014 Jul 16.
6
A novel square-planar Ni(II) complex with an amino-carboxamido-dithiolato-type ligand as an active-site model of NiSOD.一种新型的平面正方形镍(II)配合物,其配体为氨基-羧酰胺-二硫醇盐型,作为镍超氧化物歧化酶的活性位点模型。
Inorg Chem. 2014 Jul 7;53(13):6512-23. doi: 10.1021/ic402574d. Epub 2014 Jun 18.
7
Insight into the structure and mechanism of nickel-containing superoxide dismutase derived from peptide-based mimics.基于肽模拟物的镍超氧化物歧化酶结构与机制的研究进展。
Acc Chem Res. 2014 Aug 19;47(8):2332-41. doi: 10.1021/ar500060s. Epub 2014 May 13.
8
Characterization of a cross-linked protein-nucleic acid substrate radical in the reaction catalyzed by RlmN.RlmN催化反应中交联蛋白-核酸底物自由基的表征
J Am Chem Soc. 2014 Jun 11;136(23):8221-8. doi: 10.1021/ja410560p. Epub 2014 Jun 2.
9
Superoxide dismutases and superoxide reductases.超氧化物歧化酶和超氧化物还原酶。
Chem Rev. 2014 Apr 9;114(7):3854-918. doi: 10.1021/cr4005296. Epub 2014 Apr 1.
10
Radical S-adenosylmethionine enzymes.自由基S-腺苷甲硫氨酸酶
Chem Rev. 2014 Apr 23;114(8):4229-317. doi: 10.1021/cr4004709. Epub 2014 Jan 29.