Suppr超能文献

拜氏不动杆菌自然转化在生长阶段的特异性进化优势

Growth phase-specific evolutionary benefits of natural transformation in Acinetobacter baylyi.

作者信息

Utnes Ane L G, Sørum Vidar, Hülter Nils, Primicerio Raul, Hegstad Joachim, Kloos Julia, Nielsen Kaare M, Johnsen Pål J

机构信息

Department of Pharmacy, Faculty of Health Sciences, UiT The Arctic University of Norway, Tromsø, Norway.

Department of Microbiology and Infection Control, University Hospital of North Norway, Tromsø, Norway.

出版信息

ISME J. 2015 Oct;9(10):2221-31. doi: 10.1038/ismej.2015.35. Epub 2015 Apr 7.

Abstract

Natural transformation in bacteria facilitates the uptake and genomic integration of exogenous DNA. This allows horizontal exchange of adaptive traits not easily achieved by point mutations, and has a major role in the acquisition of adaptive traits exemplified by antibiotic resistance determinants and vaccination escape. Mechanisms of DNA uptake and genomic integration are well described for several naturally transformable bacterial species; however, the selective forces responsible for its evolution and maintenance are still controversial. In this study we evolved transformation-proficient and -deficient Acinetobacter baylyi for 175 days in serial transfer cultures where stress was included. We found that natural transformation-proficient populations adapted better to active growth and early stationary phase. This advantage was offset by the reduced performance in the late stationary/death phase. We demonstrate fitness trade-offs between adaptation to active growth and survival in stationary/death phase caused by antagonistic pleiotropy. The presented data suggest that the widely held assumption that recombination speeds up adaptation by rapid accumulation of multiple adaptive mutations in the same genetic background is not sufficient to fully account for the maintenance of natural transformation in bacteria.

摘要

细菌中的自然转化促进了外源DNA的摄取和基因组整合。这使得适应性性状能够进行水平交换,而这是点突变难以轻易实现的,并且在获得以抗生素抗性决定因素和疫苗逃逸为代表的适应性性状方面发挥着重要作用。对于几种自然可转化的细菌物种,DNA摄取和基因组整合的机制已有详尽描述;然而,导致其进化和维持的选择压力仍存在争议。在本研究中,我们在包含压力的连续传代培养中,使具备转化能力和缺乏转化能力的拜氏不动杆菌进化了175天。我们发现,具备自然转化能力的群体能更好地适应活跃生长和早期稳定期。但这一优势在稳定期末期/死亡期的表现下降中被抵消。我们证明了由拮抗性多效性导致的在适应活跃生长与在稳定期/死亡期存活之间的适合度权衡。所呈现的数据表明,那种认为重组通过在相同遗传背景中快速积累多个适应性突变来加速适应的普遍假设,不足以充分解释细菌中自然转化的维持。

相似文献

1
Growth phase-specific evolutionary benefits of natural transformation in Acinetobacter baylyi.
ISME J. 2015 Oct;9(10):2221-31. doi: 10.1038/ismej.2015.35. Epub 2015 Apr 7.
2
Costs and benefits of natural transformation in Acinetobacter baylyi.
BMC Microbiol. 2017 Feb 15;17(1):34. doi: 10.1186/s12866-017-0953-2.
4
Rapid evolution of diminished transformability in Acinetobacter baylyi.
J Bacteriol. 2006 Dec;188(24):8534-42. doi: 10.1128/JB.00846-06. Epub 2006 Oct 6.
5
Testing for the fitness benefits of natural transformation during community-embedded evolution.
Microbiology (Reading). 2023 Aug;169(8). doi: 10.1099/mic.0.001375.
6
Natural transformation facilitates transfer of transposons, integrons and gene cassettes between bacterial species.
PLoS Pathog. 2012;8(8):e1002837. doi: 10.1371/journal.ppat.1002837. Epub 2012 Aug 2.
8
Genome instability mediates the loss of key traits by Acinetobacter baylyi ADP1 during laboratory evolution.
J Bacteriol. 2015 Mar;197(5):872-81. doi: 10.1128/JB.02263-14. Epub 2014 Dec 15.
9
Bioluminescence-based system for rapid detection of natural transformation.
FEMS Microbiol Lett. 2016 Jul;363(13). doi: 10.1093/femsle/fnw125. Epub 2016 May 8.
10
Naturally transformable Acinetobacter sp. strain ADP1 belongs to the newly described species Acinetobacter baylyi.
Appl Environ Microbiol. 2006 Jan;72(1):932-6. doi: 10.1128/AEM.72.1.932-936.2006.

引用本文的文献

2
Surviving the storm: exploring the role of natural transformation in nutrition and DNA repair of stressed .
Appl Environ Microbiol. 2025 Jan 31;91(1):e0137124. doi: 10.1128/aem.01371-24. Epub 2024 Dec 9.
3
Effect of chemotherapeutic agents on natural transformation frequency in Acinetobacter baylyi.
Access Microbiol. 2024 Jul 10;6(7). doi: 10.1099/acmi.0.000733.v4. eCollection 2024.
4
Natural transformation-specific DprA coordinate DNA double-strand break repair pathways in heavily irradiated .
Appl Environ Microbiol. 2024 Feb 21;90(2):e0194823. doi: 10.1128/aem.01948-23. Epub 2024 Jan 9.
5
Antidepressants promote the spread of extracellular antibiotic resistance genes via transformation.
ISME Commun. 2022 Jul 28;2(1):63. doi: 10.1038/s43705-022-00147-y.
6
Testing for the fitness benefits of natural transformation during community-embedded evolution.
Microbiology (Reading). 2023 Aug;169(8). doi: 10.1099/mic.0.001375.
7
Distribution of fitness effects of cross-species transformation reveals potential for fast adaptive evolution.
ISME J. 2023 Jan;17(1):130-139. doi: 10.1038/s41396-022-01325-5. Epub 2022 Oct 12.
8
Recombination resolves the cost of horizontal gene transfer in experimental populations of .
Proc Natl Acad Sci U S A. 2022 Mar 22;119(12):e2119010119. doi: 10.1073/pnas.2119010119. Epub 2022 Mar 17.
10
Effect of Nutritional Determinants and TonB on the Natural Transformation of .
Front Microbiol. 2021 Aug 10;12:644868. doi: 10.3389/fmicb.2021.644868. eCollection 2021.

本文引用的文献

1
Gene transfer potential of outer membrane vesicles of Acinetobacter baylyi and effects of stress on vesiculation.
Appl Environ Microbiol. 2014 Jun;80(11):3469-83. doi: 10.1128/AEM.04248-13. Epub 2014 Mar 21.
2
Adaptation through genetic time travel? Fluctuating selection can drive the evolution of bacterial transformation.
Proc Biol Sci. 2013 Nov 27;281(1775):20132609. doi: 10.1098/rspb.2013.2609. Print 2014 Jan 22.
3
Bacterial natural transformation by highly fragmented and damaged DNA.
Proc Natl Acad Sci U S A. 2013 Dec 3;110(49):19860-5. doi: 10.1073/pnas.1315278110. Epub 2013 Nov 18.
4
Conservative sex and the benefits of transformation in Streptococcus pneumoniae.
PLoS Pathog. 2013;9(11):e1003758. doi: 10.1371/journal.ppat.1003758. Epub 2013 Nov 14.
5
The evolution of natural competence: disentangling costs and benefits of sex in bacteria.
Am Nat. 2013 Oct;182(4):E112-26. doi: 10.1086/671909. Epub 2013 Aug 20.
6
Exploring the costs of horizontal gene transfer.
Trends Ecol Evol. 2013 Aug;28(8):489-95. doi: 10.1016/j.tree.2013.04.002. Epub 2013 May 22.
7
Significant variation in transformation frequency in Streptococcus pneumoniae.
ISME J. 2013 Apr;7(4):791-9. doi: 10.1038/ismej.2012.170. Epub 2013 Jan 10.
9
A trade-off between the fitness cost of functional integrases and long-term stability of integrons.
PLoS Pathog. 2012;8(11):e1003043. doi: 10.1371/journal.ppat.1003043. Epub 2012 Nov 29.
10
The multiplicity of divergence mechanisms in a single evolving population.
Genome Biol. 2012 Jun 8;13(6):R41. doi: 10.1186/gb-2012-13-6-r41.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验