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链球菌及其他低GC含量革兰氏阳性菌病原体中的顺式编码非编码反义RNA

Cis-encoded non-coding antisense RNAs in streptococci and other low GC Gram (+) bacterial pathogens.

作者信息

Cho Kyu Hong, Kim Jeong-Ho

机构信息

Department of Biology, Indiana State University Terre Haute, IN, USA.

Department of Biochemistry and Molecular Medicine, The George Washington University School of Medicine and Health Science Washington, DC, USA.

出版信息

Front Genet. 2015 Mar 26;6:110. doi: 10.3389/fgene.2015.00110. eCollection 2015.

Abstract

Due to recent advances of bioinformatics and high throughput sequencing technology, discovery of regulatory non-coding RNAs in bacteria has been increased to a great extent. Based on this bandwagon, many studies searching for trans-acting small non-coding RNAs in streptococci have been performed intensively, especially in the important human pathogen, group A and B streptococci. However, studies for cis-encoded non-coding antisense RNAs in streptococci have been scarce. A recent study shows antisense RNAs are involved in virulence gene regulation in group B streptococcus, S. agalactiae. This suggests antisense RNAs could have important roles in the pathogenesis of streptococcal pathogens. In this review, we describe recent discoveries of chromosomal cis-encoded antisense RNAs in streptococcal pathogens and other low GC Gram (+) bacteria to provide a guide for future studies.

摘要

由于生物信息学和高通量测序技术的最新进展,细菌中调控性非编码RNA的发现有了很大程度的增加。基于这一潮流,许多在链球菌中寻找反式作用小非编码RNA的研究已经深入开展,特别是在重要的人类病原体A群和B群链球菌中。然而,关于链球菌中顺式编码的非编码反义RNA的研究却很少。最近一项研究表明,反义RNA参与了B群链球菌(无乳链球菌)毒力基因的调控。这表明反义RNA可能在链球菌病原体的发病机制中发挥重要作用。在这篇综述中,我们描述了链球菌病原体和其他低GC革兰氏阳性菌中染色体顺式编码反义RNA的最新发现,并为未来的研究提供指导。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aaf5/4374534/2aaad7199c85/fgene-06-00110-g0001.jpg

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