• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

光系统II放氧复合体中氧气释放和氧-氧键形成的替代机制。

Alternative mechanisms for O2 release and O-O bond formation in the oxygen evolving complex of photosystem II.

作者信息

Li Xichen, Siegbahn Per E M

机构信息

College of Chemistry, Beijing Normal University, 100875, Beijing, China.

出版信息

Phys Chem Chem Phys. 2015 May 14;17(18):12168-74. doi: 10.1039/c5cp00138b.

DOI:10.1039/c5cp00138b
PMID:25879997
Abstract

In a previous detailed study of all the steps of water oxidation in photosystem II, it was surprisingly found that O2 release is as critical for the rate as O-O bond formation. A new mechanism for O2 release has now been found, which can be described as an opening followed by a closing of the interior of the oxygen evolving complex. A transition state for peroxide rotation forming a superoxide radical, missed in the previous study, and a structural change around the outside manganese are two key steps in the new mechanism. However, O2 release may still remain rate-limiting. Additionally, for the step forming the O-O bond, an alternative, experimentally suggested, mechanism was investigated. The new model calculations can rule out the precise use of that mechanism. However, a variant with a rotation of the ligands around the outer manganese by about 30° will give a low barrier, competitive with the old DFT mechanism. Both these mechanisms use an oxyl-oxo mechanism for O-O bond formation involving the same two manganese atoms and the central oxo group (O5).

摘要

在之前对光系统II中水分子氧化所有步骤的详细研究中,令人惊讶地发现,氧气释放对反应速率的关键程度与氧 - 氧键形成相当。现在已经发现了一种新的氧气释放机制,其可描述为放氧复合体内部先打开然后关闭。先前研究中遗漏的过氧化物旋转形成超氧自由基的过渡态以及外部锰周围的结构变化是新机制中的两个关键步骤。然而,氧气释放可能仍然是限速步骤。此外,对于形成氧 - 氧键的步骤,研究了一种实验提出的替代机制。新的模型计算可以排除该机制的精确应用。然而,配体围绕外部锰旋转约30°的变体将产生一个低势垒,可与旧的密度泛函理论机制相竞争。这两种机制都使用氧代 - 氧机制形成氧 - 氧键,涉及相同的两个锰原子和中心氧代基团(O5)。

相似文献

1
Alternative mechanisms for O2 release and O-O bond formation in the oxygen evolving complex of photosystem II.光系统II放氧复合体中氧气释放和氧-氧键形成的替代机制。
Phys Chem Chem Phys. 2015 May 14;17(18):12168-74. doi: 10.1039/c5cp00138b.
2
Structures and energetics for O2 formation in photosystem II.在光系统 II 中形成 O2 的结构和能量学。
Acc Chem Res. 2009 Dec 21;42(12):1871-80. doi: 10.1021/ar900117k.
3
Water oxidation mechanism in photosystem II, including oxidations, proton release pathways, O-O bond formation and O2 release.光系统II中的水氧化机制,包括氧化、质子释放途径、O-O键形成和O₂释放。
Biochim Biophys Acta. 2013 Aug-Sep;1827(8-9):1003-19. doi: 10.1016/j.bbabio.2012.10.006. Epub 2012 Oct 24.
4
Theoretical studies of O-O bond formation in photosystem II.光系统II中氧-氧键形成的理论研究。
Inorg Chem. 2008 Mar 17;47(6):1779-86. doi: 10.1021/ic7012057.
5
Photosynthetic water oxidation: insights from manganese model chemistry.光合作用水氧化:锰模型化学的见解。
Acc Chem Res. 2015 Mar 17;48(3):567-74. doi: 10.1021/ar5004175. Epub 2015 Mar 2.
6
Mechanism and energy diagram for O-O bond formation in the oxygen-evolving complex in photosystem II.光系统II中析氧复合物中O-O键形成的机制和能量图。
Philos Trans R Soc Lond B Biol Sci. 2008 Mar 27;363(1494):1221-8; discussion 1228. doi: 10.1098/rstb.2007.2218.
7
Theoretical clues to the mechanism of dioxygen formation at the oxygen-evolving complex of photosystem II.关于光系统II放氧复合体中双氧形成机制的理论线索。
Chemistry. 2002 Jun 3;8(11):2508-15. doi: 10.1002/1521-3765(20020603)8:11<2508::AID-CHEM2508>3.0.CO;2-A.
8
Substrate water exchange for the oxygen evolving complex in PSII in the S1, S2, and S3 states.PSII 中氧释放复合体在 S1、S2 和 S3 态下的底物水交换。
J Am Chem Soc. 2013 Jun 26;135(25):9442-9. doi: 10.1021/ja401517e. Epub 2013 Jun 11.
9
Biological water oxidation.生物水氧化。
Acc Chem Res. 2013 Jul 16;46(7):1588-96. doi: 10.1021/ar3003249. Epub 2013 Mar 18.
10
Concerted Mechanism of Water Insertion and O Release during the S to S Transition of the Oxygen-Evolving Complex in Photosystem II.水插入和 O 释放的协同机制在光合作用系统 II 的氧释放复合物 S 到 S 的转变过程中。
J Phys Chem B. 2018 Jun 28;122(25):6491-6502. doi: 10.1021/acs.jpcb.8b03465. Epub 2018 Jun 15.

引用本文的文献

1
The Low Oxidation State Paradigm is More Consistent with XFEL Observations of the S₃ → [S₄] → S₀ Transition in Photosystem II.低氧化态范式与X射线自由电子激光对光系统II中S₃ → [S₄] → S₀转变的观测结果更为一致。
Chemistry. 2025 Jul 8;31(38):e202501010. doi: 10.1002/chem.202501010. Epub 2025 Jun 18.
2
The Effect of Removal of External Proteins PsbO, PsbP and PsbQ on Flash-Induced Molecular Oxygen Evolution and Its Biphasicity in Tobacco PSII.去除外部蛋白PsbO、PsbP和PsbQ对烟草光系统II中闪光诱导的分子氧释放及其双相性的影响
Curr Issues Mol Biol. 2024 Jul 8;46(7):7187-7218. doi: 10.3390/cimb46070428.
3
Closing Kok's cycle of nature's water oxidation catalysis.
闭合科克自然水氧化催化循环。
Nat Commun. 2024 Jul 16;15(1):5982. doi: 10.1038/s41467-024-50210-6.
4
On the simulation and interpretation of substrate-water exchange experiments in photosynthetic water oxidation.关于光合水氧化中底物-水交换实验的模拟与解读
Photosynth Res. 2024 Dec;162(2-3):413-426. doi: 10.1007/s11120-024-01084-8. Epub 2024 Mar 21.
5
Assignment of the slowly exchanging substrate water of nature's water-splitting cofactor.自然界水分解辅因子中缓慢交换的底物水的分配
Proc Natl Acad Sci U S A. 2024 Mar 12;121(11):e2319374121. doi: 10.1073/pnas.2319374121. Epub 2024 Mar 4.
6
Is There a Different Mechanism for Water Oxidation in Higher Plants?高等植物中是否存在不同的水氧化机制?
J Phys Chem B. 2023 Aug 3;127(30):6643-6647. doi: 10.1021/acs.jpcb.3c03029. Epub 2023 Jul 19.
7
Does Serial Femtosecond Crystallography Depict State-Specific Catalytic Intermediates of the Oxygen-Evolving Complex?串行飞秒晶体学是否描绘了放氧复合酶的状态特异性催化中间物?
J Am Chem Soc. 2023 May 17;145(19):10604-10621. doi: 10.1021/jacs.3c00489. Epub 2023 May 3.
8
Kinetic modeling of substrate-water exchange in Photosystem II.光系统II中底物-水交换的动力学建模
BBA Adv. 2021 May 11;1:100014. doi: 10.1016/j.bbadva.2021.100014. eCollection 2021.
9
Solar energy conversion by photosystem II: principles and structures.光合作用系统 II 的太阳能转化:原理与结构。
Photosynth Res. 2023 Jun;156(3):279-307. doi: 10.1007/s11120-022-00991-y. Epub 2023 Feb 24.
10
Reversible Structural Isomerization of Nature's Water Oxidation Catalyst Prior to O-O Bond Formation.天然水氧化催化剂在形成 O-O 键之前的可逆结构异构化。
J Am Chem Soc. 2022 Jul 6;144(26):11736-11747. doi: 10.1021/jacs.2c03528. Epub 2022 Jun 24.