Tsachaki Maria, Birk Julia, Egert Aurélie, Odermatt Alex
Division of Molecular and Systems Toxicology, Department of Pharmaceutical Sciences, University of Basel, Klingelbergstrasse 50, 4056 Basel, Switzerland.
Division of Molecular and Systems Toxicology, Department of Pharmaceutical Sciences, University of Basel, Klingelbergstrasse 50, 4056 Basel, Switzerland.
Biochim Biophys Acta. 2015 Jul;1853(7):1672-82. doi: 10.1016/j.bbamcr.2015.04.002. Epub 2015 Apr 15.
Membrane proteins of the endoplasmic reticulum (ER) are involved in a wide array of essential cellular functions. Identification of the topology of membrane proteins can provide significant insight into their mechanisms of action and biological roles. This is particularly important for membrane enzymes, since their topology determines the subcellular site where a biochemical reaction takes place and the dependence on luminal or cytosolic co-factor pools and substrates. The methods currently available for the determination of topology of proteins are rather laborious and require post-lysis or post-fixation manipulation of cells. In this work, we have developed a simple method for defining intracellular localization and topology of ER membrane proteins in living cells, based on the fusion of the respective protein with redox-sensitive green-fluorescent protein (roGFP). We validated the method and demonstrated that roGFP fusion proteins constitute a reliable tool for the study of ER membrane protein topology, using as control microsomal 11β-hydroxysteroid dehydrogenase (11β-HSD) proteins whose topology has been resolved, and comparing with an independent approach. We then implemented this method to determine the membrane topology of six microsomal members of the 17β-hydroxysteroid dehydrogenase (17β-HSD) family. The results revealed a luminal orientation of the catalytic site for three enzymes, i.e. 17β-HSD6, 7 and 12. Knowledge of the intracellular location of the catalytic site of these enzymes will enable future studies on their biological functions and on the role of the luminal co-factor pool.
内质网(ER)的膜蛋白参与了一系列重要的细胞功能。确定膜蛋白的拓扑结构能够为深入了解其作用机制和生物学功能提供重要线索。这对于膜酶来说尤为重要,因为它们的拓扑结构决定了生化反应发生的亚细胞位点以及对腔内或胞质辅因子池和底物的依赖性。目前可用于确定蛋白质拓扑结构的方法相当繁琐,并且需要对细胞进行裂解后或固定后处理。在这项工作中,我们基于将相应蛋白质与氧化还原敏感型绿色荧光蛋白(roGFP)融合,开发了一种用于在活细胞中定义内质网膜蛋白的细胞内定位和拓扑结构的简单方法。我们验证了该方法,并证明roGFP融合蛋白构成了研究内质网膜蛋白拓扑结构的可靠工具,使用拓扑结构已解析的微粒体11β-羟基类固醇脱氢酶(11β-HSD)蛋白作为对照,并与一种独立方法进行比较。然后,我们运用此方法确定了17β-羟基类固醇脱氢酶(17β-HSD)家族六个微粒体成员的膜拓扑结构。结果显示,三种酶(即17β-HSD6、7和12)的催化位点位于腔内。了解这些酶催化位点的细胞内位置将有助于未来对其生物学功能以及腔内辅因子池作用的研究。