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人神经干细胞系在三维培养中的分化、微小RNA及潜在靶基因分析

Differentiation of a Human Neural Stem Cell Line on Three Dimensional Cultures, Analysis of MicroRNA and Putative Target Genes.

作者信息

Stevanato Lara, Hicks Caroline, Sinden John D

机构信息

ReNeuron;

ReNeuron.

出版信息

J Vis Exp. 2015 Apr 12(98):52410. doi: 10.3791/52410.

DOI:10.3791/52410
PMID:25938519
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4541566/
Abstract

Neural stem cells (NSCs) are capable of self-renewal and differentiation into neurons, astrocytes and oligodendrocytes under specific local microenvironments. In here, we present a set of methods used for three dimensional (3D) differentiation and miRNA analysis of a clonal human neural stem cell (hNSC) line, currently in clinical trials for stroke disability (NCT01151124 and NCT02117635, Clinicaltrials.gov). HNSCs were derived from an ethical approved first trimester human fetal cortex and conditionally immortalized using retroviral integration of a single copy of the c-mycER(TAM)construct. We describe how to measure axon process outgrowth of hNSCs differentiated on 3D scaffolds and how to quantify associated changes in miRNA expression using PCR array. Furthermore we exemplify computational analysis with the aim of selecting miRNA putative targets. SOX5 and NR4A3 were identified as suitable miRNA putative target of selected significantly down-regulated miRNAs in differentiated hNSC. MiRNA target validation was performed on SOX5 and NR4A3 3'UTRs by dual reporter plasmid transfection and dual luciferase assay.

摘要

神经干细胞(NSCs)能够自我更新,并在特定的局部微环境下分化为神经元、星形胶质细胞和少突胶质细胞。在此,我们展示了一套用于对一种克隆性人类神经干细胞(hNSC)系进行三维(3D)分化和miRNA分析的方法,该细胞系目前正处于中风残疾的临床试验中(NCT01151124和NCT02117635,Clinicaltrials.gov)。hNSCs源自经伦理批准的孕早期人类胎儿皮质,并通过逆转录病毒整合单拷贝的c-mycER(TAM)构建体进行条件性永生化。我们描述了如何测量在3D支架上分化的hNSCs的轴突生长过程,以及如何使用PCR阵列定量miRNA表达的相关变化。此外,我们举例说明了旨在选择miRNA假定靶点的计算分析。SOX5和NR4A3被确定为在分化的hNSC中选定的显著下调miRNA的合适假定靶点。通过双报告质粒转染和双荧光素酶测定对SOX5和NR4A3 3'UTR进行miRNA靶点验证。

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本文引用的文献

1
The effects of microRNAs on human neural stem cell differentiation in two- and three-dimensional cultures.微小RNA对二维和三维培养中人类神经干细胞分化的影响。
Stem Cell Res Ther. 2014 Apr 11;5(2):49. doi: 10.1186/scrt437.
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Brain repair: cell therapy in stroke.脑修复:中风的细胞疗法
Stem Cells Cloning. 2014 Feb 21;7:31-44. doi: 10.2147/SCCAA.S38003. eCollection 2014.
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Stem cells in tissue repair and regeneration.组织修复和再生中的干细胞。
J Anat. 2018 Aug;233(2):155-166. doi: 10.1111/joa.12827. Epub 2018 May 10.
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Investigation of Content, Stoichiometry and Transfer of miRNA from Human Neural Stem Cell Line Derived Exosomes.人神经干细胞系来源外泌体中miRNA的含量、化学计量及转移研究
PLoS One. 2016 Jan 11;11(1):e0146353. doi: 10.1371/journal.pone.0146353. eCollection 2016.
J Invest Dermatol. 2012 Jun;132(6):1538-41. doi: 10.1038/jid.2012.77.
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Implantation site and lesion topology determine efficacy of a human neural stem cell line in a rat model of chronic stroke.种植部位和病变部位决定了人神经干细胞系在慢性卒中大鼠模型中的疗效。
Stem Cells. 2012 Apr;30(4):785-96. doi: 10.1002/stem.1024.
5
Identifying targets of human micrornas with the LightSwitch Luciferase Assay System using 3'UTR-reporter constructs and a microRNA mimic in adherent cells.在贴壁细胞中使用3'UTR报告基因构建体和微小RNA模拟物,通过LightSwitch荧光素酶检测系统鉴定人类微小RNA的靶标。
J Vis Exp. 2011 Sep 28(55):3343. doi: 10.3791/3343.
6
Highly efficient miRNA-mediated reprogramming of mouse and human somatic cells to pluripotency.高效 miRNA 介导的小鼠和人体细胞重编程为多能性。
Cell Stem Cell. 2011 Apr 8;8(4):376-88. doi: 10.1016/j.stem.2011.03.001.
7
Quantifying synapses: an immunocytochemistry-based assay to quantify synapse number.突触定量:一种基于免疫细胞化学的突触数量定量检测方法。
J Vis Exp. 2010 Nov 16(45):2270. doi: 10.3791/2270.
8
Effect of 3D-scaffold formation on differentiation and survival in human neural progenitor cells.三维支架结构形成对人神经祖细胞分化和存活的影响。
Biomed Eng Online. 2010 Nov 11;9:70. doi: 10.1186/1475-925X-9-70.
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Alvetex®: polystyrene scaffold technology for routine three dimensional cell culture.Alvetex®:用于常规三维细胞培养的聚苯乙烯支架技术。
Methods Mol Biol. 2011;695:323-40. doi: 10.1007/978-1-60761-984-0_20.
10
Stem cells feel the difference.干细胞有感知差异的能力。
Nat Methods. 2010 Sep;7(9):695-7. doi: 10.1038/nmeth0910-695.