Department of Physics, Sungkyunkwan University, Suwon 440-746, Korea.
Sungkyunkwan Advanced Institute of Nanotechnology (SAINT), Sungkyunkwan University, Suwon 440-746, Korea.
Nat Nanotechnol. 2015 Jun;10(6):528-33. doi: 10.1038/nnano.2015.87. Epub 2015 May 11.
Biology provides numerous examples of self-replicating machines, but artificially engineering such complex systems remains a formidable challenge. In particular, although simple artificial self-replicating systems including wooden blocks, magnetic systems, modular robots and synthetic molecular systems have been devised, such kinematic self-replicators are rare compared with examples of theoretical cellular self-replication. One of the principal reasons for this is the amount of complexity that arises when you try to incorporate self-replication into a physical medium. In this regard, DNA is a prime candidate material for constructing self-replicating systems due to its ability to self-assemble through molecular recognition. Here, we show that DNA T-motifs, which self-assemble into ring structures, can be designed to self-replicate through toehold-mediated strand displacement reactions. The inherent design of these rings allows the population dynamics of the systems to be controlled. We also analyse the replication scheme within a universal framework of self-replication and derive a quantitative metric of the self-replicability of the rings.
生物学提供了许多自我复制机器的例子,但人工设计这样复杂的系统仍然是一个艰巨的挑战。特别是,虽然已经设计出了包括木块、磁性系统、模块化机器人和合成分子系统在内的简单人工自我复制系统,但与理论上的细胞自我复制的例子相比,这种运动学自我复制器非常罕见。造成这种情况的一个主要原因是,当你试图将自我复制纳入物理介质时,会出现大量的复杂性。在这方面,由于 DNA 能够通过分子识别进行自我组装,因此它是构建自我复制系统的主要候选材料。在这里,我们展示了可以通过 DNA T-基序设计成自我复制的环形结构,这些基序可以通过链置换反应进行自我复制。这些环的固有设计允许控制系统的种群动态。我们还在自我复制的通用框架内分析了复制方案,并得出了环的自我复制性的定量度量。