de Almeida Naomi M, Neumann Sarah, Mesman Rob J, Ferousi Christina, Keltjens Jan T, Jetten Mike S M, Kartal Boran, van Niftrik Laura
Department of Microbiology, Institute for Water and Wetland Research, Radboud University Nijmegen, Nijmegen, The Netherlands.
Department of Microbiology, Institute for Water and Wetland Research, Radboud University Nijmegen, Nijmegen, The Netherlands Kluyver Laboratory for Biotechnology, Delft University of Technology, Delft, The Netherlands.
J Bacteriol. 2015 Jul;197(14):2432-41. doi: 10.1128/JB.00186-15. Epub 2015 May 11.
Anaerobic ammonium-oxidizing (anammox) bacteria oxidize ammonium with nitrite as the terminal electron acceptor to form dinitrogen gas in the absence of oxygen. Anammox bacteria have a compartmentalized cell plan with a central membrane-bound "prokaryotic organelle" called the anammoxosome. The anammoxosome occupies most of the cell volume, has a curved membrane, and contains conspicuous tubule-like structures of unknown identity and function. It was suggested previously that the catalytic reactions of the anammox pathway occur in the anammoxosome, and that proton motive force was established across its membrane. Here, we used antibodies raised against five key enzymes of the anammox catabolism to determine their cellular location. The antibodies were raised against purified native hydroxylamine oxidoreductase-like protein kustc0458 with its redox partner kustc0457, hydrazine dehydrogenase (HDH; kustc0694), hydroxylamine oxidase (HOX; kustc1061), nitrite oxidoreductase (NXR; kustd1700/03/04), and hydrazine synthase (HZS; kuste2859-61) of the anammox bacterium Kuenenia stuttgartiensis. We determined that all five protein complexes were exclusively located inside the anammoxosome matrix. Four of the protein complexes did not appear to form higher-order protein organizations. However, the present data indicated for the first time that NXR is part of the tubule-like structures, which may stretch the whole length of the anammoxosome. These findings support the anammoxosome as the locus of catabolic reactions of the anammox pathway.
Anammox bacteria are environmentally relevant microorganisms that contribute significantly to the release of fixed nitrogen in nature. Furthermore, the anammox process is applied for nitrogen removal from wastewater as an environment-friendly and cost-effective technology. These microorganisms feature a unique cellular organelle, the anammoxosome, which was proposed to contain the energy metabolism of the cell and tubule-like structures with hitherto unknown function. Here, we purified five native enzymes catalyzing key reactions in the anammox metabolism and raised antibodies against these in order to localize them within the cell. We showed that all enzymes were located within the anammoxosome, and nitrite oxidoreductase was located exclusively at the tubule-like structures, providing the first insights into the function of these subcellular structures.
厌氧氨氧化(anammox)细菌在无氧条件下以亚硝酸盐作为末端电子受体氧化铵,形成氮气。厌氧氨氧化细菌具有分区化的细胞结构,有一个位于中央的膜结合“原核细胞器”,称为厌氧氨氧化体。厌氧氨氧化体占据细胞的大部分体积,有一个弯曲的膜,并含有身份和功能不明的明显的管状结构。先前有人提出,厌氧氨氧化途径的催化反应发生在厌氧氨氧化体中,并且质子动力是在其膜上建立的。在这里,我们使用针对厌氧氨氧化分解代谢的五种关键酶产生的抗体来确定它们在细胞中的位置。这些抗体是针对纯化的天然羟胺氧化还原酶样蛋白kustc0458及其氧化还原伴侣kustc0457、肼脱氢酶(HDH;kustc0694)、羟胺氧化酶(HOX;kustc1061)、亚硝酸盐氧化还原酶(NXR;kustd1700/03/04)和肼合酶(HZS;kuste2859 - 61)产生的,这些酶来自厌氧氨氧化细菌斯氏库蚊(Kuenenia stuttgartiensis)。我们确定所有这五种蛋白质复合物都只位于厌氧氨氧化体基质内。其中四种蛋白质复合物似乎没有形成更高阶的蛋白质组织。然而,目前的数据首次表明NXR是管状结构的一部分,这些管状结构可能延伸到厌氧氨氧化体的整个长度。这些发现支持厌氧氨氧化体是厌氧氨氧化途径分解代谢反应的场所。
厌氧氨氧化细菌是与环境相关的微生物,在自然界中对固定氮的释放有重要贡献。此外,厌氧氨氧化过程作为一种环境友好且具有成本效益的技术,被应用于从废水中去除氮。这些微生物具有一种独特的细胞器——厌氧氨氧化体,据推测它包含细胞的能量代谢以及功能迄今未知的管状结构。在这里,我们纯化了催化厌氧氨氧化代谢中关键反应的五种天然酶,并针对它们产生抗体,以便在细胞内定位它们。我们表明所有酶都位于厌氧氨氧化体内,并且亚硝酸盐氧化还原酶只位于管状结构中,这为这些亚细胞结构的功能提供了初步见解。