Suppr超能文献

以青藏高原特有植物沙鞭属(禾本科:三齿稃亚科)为例的植物物种界定

Species delimitation in plants using the Qinghai-Tibet Plateau endemic Orinus (Poaceae: Tridentinae) as an example.

作者信息

Su Xu, Wu Guili, Li Lili, Liu Jianquan

机构信息

State Key Laboratory of Grassland Agro-Ecosystem, School of Life Science, Lanzhou University, Lanzhou 730000, PR China and Key Laboratory of Education Ministry of Environments and Resources in the Qinghai-Tibet Plateau, School of Geography and Life Science, Qinghai Normal University, Xining 810008, PR China State Key Laboratory of Grassland Agro-Ecosystem, School of Life Science, Lanzhou University, Lanzhou 730000, PR China and Key Laboratory of Education Ministry of Environments and Resources in the Qinghai-Tibet Plateau, School of Geography and Life Science, Qinghai Normal University, Xining 810008, PR China.

State Key Laboratory of Grassland Agro-Ecosystem, School of Life Science, Lanzhou University, Lanzhou 730000, PR China and Key Laboratory of Education Ministry of Environments and Resources in the Qinghai-Tibet Plateau, School of Geography and Life Science, Qinghai Normal University, Xining 810008, PR China.

出版信息

Ann Bot. 2015 Jul;116(1):35-48. doi: 10.1093/aob/mcv062. Epub 2015 May 18.

Abstract

BACKGROUND AND AIMS

Accurate identification of species is essential for the majority of biological studies. However, defining species objectively and consistently remains a challenge, especially for plants distributed in remote regions where there is often a lack of sufficient previous specimens. In this study, multiple approaches and lines of evidence were used to determine species boundaries for plants occurring in the Qinghai-Tibet Plateau, using the genus Orinus (Poaceae) as a model system for an integrative approach to delimiting species.

METHODS

A total of 786 individuals from 102 populations of six previously recognized species were collected for niche, morphological and genetic analyses. Three plastid DNA regions (matK, rbcL and trnH-psbA) and one nuclear DNA region [internal transcribed space (ITS)] were sequenced.

KEY RESULTS

Whereas six species had been previously recognized, statistical analyses based on character variation, molecular data and niche differentiation identified only two well-delimited clusters, together with a third possibly originating from relatively recent hybridization between, or historical introgression from, the other two.

CONCLUSIONS

Based on a principle of integrative species delimitation to reconcile different sources of data, the results provide compelling evidence that the six previously recognized species of the genus Orinus that were examined should be reduced to two, with new circumscriptions, and a third, identified in this study, should be described as a new species. This empirical study highlights the value of applying genetic differentiation, morphometric statistics and ecological niche modelling in an integrative approach to re-circumscribing species boundaries. The results produce relatively objective, operational and unbiased taxonomic classifications of plants occurring in remote regions.

摘要

背景与目的

准确识别物种对于大多数生物学研究至关重要。然而,客观且一致地界定物种仍然是一项挑战,特别是对于分布在偏远地区的植物,那里往往缺乏足够的先前标本。在本研究中,采用了多种方法和多条证据来确定青藏高原植物的物种界限,以猬草属(禾本科)作为综合界定物种方法的模型系统。

方法

从六个先前认可物种的102个种群中收集了总共786个个体,用于生态位、形态和遗传分析。对三个叶绿体DNA区域(matK、rbcL和trnH-psbA)和一个核DNA区域[内部转录间隔区(ITS)]进行了测序。

主要结果

虽然先前已认可六个物种,但基于性状变异、分子数据和生态位分化的统计分析仅识别出两个界限分明的类群,以及第三个可能源自其他两个类群之间相对较新的杂交或历史渐渗的类群。

结论

基于整合物种界定以协调不同数据来源的原则,结果提供了令人信服的证据,即所研究的猬草属六个先前认可的物种应归为两个,并重新界定范围,本研究中识别出的第三个物种应描述为一个新物种。这项实证研究强调了在重新界定物种界限的综合方法中应用遗传分化、形态计量统计和生态位建模的价值。结果为偏远地区植物产生了相对客观、可操作且无偏差的分类学分类。

相似文献

2
Evaluation of candidate barcoding markers in Orinus (Poaceae).
Genet Mol Res. 2016 Apr 26;15(2):gmr7714. doi: 10.4238/gmr.15027714.
3
Adaptive radiation in Orinus, an endemic alpine grass of the Qinghai-Tibet Plateau, based on comparative transcriptomic analysis.
J Plant Physiol. 2022 Oct;277:153786. doi: 10.1016/j.jplph.2022.153786. Epub 2022 Aug 7.
4
Molecular phylogeny and biogeography of the Qinghai-Tibet Plateau endemic Nannoglottis (Asteraceae).
Mol Phylogenet Evol. 2002 Jun;23(3):307-25. doi: 10.1016/s1055-7903(02)00039-8.
7
10
Gone with the trees: Phylogeography of Rhodiola sect. Trifida (Crassulaceae) reveals multiple refugia on the Qinghai-Tibetan Plateau.
Mol Phylogenet Evol. 2018 Apr;121:110-120. doi: 10.1016/j.ympev.2018.01.001. Epub 2018 Jan 5.

引用本文的文献

1
A composite universal DNA signature for the tree of life.
Nat Ecol Evol. 2025 Jun 25. doi: 10.1038/s41559-025-02752-1.
3
Genetically- and environmentally-dependent processes drive interspecific and intraspecific divergence in the Chinese relict endemic genus .
Plant Divers. 2024 Apr 26;46(5):585-599. doi: 10.1016/j.pld.2024.04.008. eCollection 2024 Sep.
5
A cryptic syngameon within shrubs revealed: Implications for conservation in changing subarctic environments.
Evol Appl. 2024 Apr 17;17(4):e13689. doi: 10.1111/eva.13689. eCollection 2024 Apr.
8
Population structure and phylogeography of three closely related tree peonies.
Ecol Evol. 2023 Jun 1;13(6):e10073. doi: 10.1002/ece3.10073. eCollection 2023 Jun.
9
Taxonomic delimitation and molecular identification of clusters within the species (Rutaceae) in China.
PhytoKeys. 2022 May 12;196:1-20. doi: 10.3897/phytokeys.196.79566. eCollection 2022.
10
Multiple lines of evidence supports the two varieties of (Gentianaceae) as two species.
Plant Divers. 2021 Sep 23;44(3):290-299. doi: 10.1016/j.pld.2021.09.004. eCollection 2022 May.

本文引用的文献

1
Applying plant DNA barcodes for Rosaceae species identification.
Cladistics. 2011 Apr;27(2):165-170. doi: 10.1111/j.1096-0031.2010.00328.x.
2
CONFIDENCE LIMITS ON PHYLOGENIES: AN APPROACH USING THE BOOTSTRAP.
Evolution. 1985 Jul;39(4):783-791. doi: 10.1111/j.1558-5646.1985.tb00420.x.
5
Miocene-Pliocene speciation, introgression, and migration of Patis and Ptilagrostis (Poaceae: Stipeae).
Mol Phylogenet Evol. 2014 Jan;70:244-59. doi: 10.1016/j.ympev.2013.09.018. Epub 2013 Oct 3.
8
Hybridization and speciation.
J Evol Biol. 2013 Feb;26(2):229-46. doi: 10.1111/j.1420-9101.2012.02599.x.
9
An exploration of species boundaries in turret-building tarantulas of the Mojave Desert (Araneae, Mygalomorphae, Theraphosidae, Aphonopelma).
Mol Phylogenet Evol. 2013 Jan;66(1):327-40. doi: 10.1016/j.ympev.2012.10.004. Epub 2012 Oct 22.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验