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利用分子建模和统计分析进行抗疟药物的合理设计

Rational Design of Antimalarial Drugs Using Molecular Modeling and Statistical Analysis.

作者信息

Santos Cleydson Breno Rodrigues dos, Lobato Cleison Carvalho, Braga Francinaldo Sarges, Costa Josivan da Silva, Favacho Hugo Alexandre Silva, Carvalho Jose Carlos Tavares, Macedo Williams Jorge da Cruz, Brasil Davi Do Socorro Barros, Silva Carlos Henrique Tomich de Paula da, Silva Hage-Melim Lorane Izabel da

机构信息

Laboratory of Modeling and Computational Chemistry, Federal University of Amapa, Macapa, Amapa, 68902-280, Brazil.

出版信息

Curr Pharm Des. 2015;21(28):4112-27. doi: 10.2174/1381612821666150528121423.

Abstract

Artemisinin is an antimalarial compound isolated from Artemisia annua L. that is effective against Plasmodium falciparum. This paper proposes the development of new antimalarial derivatives of artemisinin from a SAR study and statistical analysis by multiple linear regression (MLR). The HF/6-31G** method was used to determine the molecular properties of artemisinin and 10 derivatives with antimalarial action. MEP maps and molecular docking were used to study the interface between ligand and receptor (heme). The Pearson correlation was used to choose the most important properties interrelated to the antimalarial activity: Hydration Energy (HE), Energy of the Complex (Ecplex), bond length (FeO1), and maximum index of R/Electronegativity of Sanderson (RTe+). After the Pearson correlation, 72 MLR models were built between antimalarial activity and molecular properties; the statistical quality of the models was evaluated by means of correlation coefficient (r), squared correlation coefficient (r(2)), explained variance (adjusted R(2)), standard error of estimate (SEE), and variance ratio (F), and only four models showed predictive ability. The selected models were used to predict the antimalarial activity of ten new artemisinin derivatives (test set) with unknown activity, and only eight of these compounds were predicted to be more potent than artemisinin, and were therefore subjected to theoretical studies of pharmacokinetic and toxicological properties. The test set showed satisfactory results for six new artemisinin compounds which is a promising factor for future synthesis and biological assays.

摘要

青蒿素是从黄花蒿中分离出的一种抗疟化合物,对恶性疟原虫有效。本文通过结构活性关系(SAR)研究和多元线性回归(MLR)统计分析,提出了青蒿素新型抗疟衍生物的开发。采用HF/6-31G**方法测定青蒿素和10种具有抗疟作用的衍生物的分子性质。利用分子静电势(MEP)图和分子对接研究配体与受体(血红素)之间的界面。采用皮尔逊相关性分析来选择与抗疟活性最相关的重要性质:水合能(HE)、复合物能量(Ecplex)、键长(FeO1)和桑德森电负性R/电负性最大指数(RTe+)。经过皮尔逊相关性分析后,建立了72个抗疟活性与分子性质之间的MLR模型;通过相关系数(r)、决定系数(r(2))、调整后的决定系数(调整R(2))、估计标准误差(SEE)和方差比(F)对模型的统计质量进行评估,只有四个模型具有预测能力。所选模型用于预测10种活性未知的新型青蒿素衍生物(测试集)的抗疟活性,其中只有8种化合物被预测比青蒿素更有效,因此对其进行了药代动力学和毒理学性质的理论研究。测试集对6种新型青蒿素化合物显示出令人满意的结果,这对未来的合成和生物学测定来说是一个有前景的因素。

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