Gu Zonglin, Yang Zaixing, Chong Yu, Ge Cuicui, Weber Jeffrey K, Bell David R, Zhou Ruhong
Institute of Quantitative Biology and Medicine, SRMP and RAD-X, Collaborative Innovation Center of Radiation Medicine of Jiangsu Higher Education Institutions, Soochow University, Suzhou 215123, China.
IBM Thomas J. Watson Research Center, Yorktown Heights, NY 10598, USA.
Sci Rep. 2015 Jun 4;5:10886. doi: 10.1038/srep10886.
The adsorption of proteins onto carbon-based nanomaterials (CBNs) is dictated by hydrophobic and π-π interactions between aliphatic and aromatic residues and the conjugated CBN surface. Accordingly, protein adsorption is highly sensitive to topological constraints imposed by CBN surface structure; in particular, adsorption capacity is thought to increase as the incident surface curvature decreases. In this work, we couple Molecular Dynamics (MD) simulations with fluorescence spectroscopy experiments to characterize this curvature dependence in detail for the model protein bovine serum albumin (BSA). By studying BSA adsorption onto carbon nanotubes of increasing radius (featuring descending local curvatures) and a flat graphene sheet, we confirm that adsorption capacity is indeed enhanced on flatter surfaces. Naïve fluorescence experiments featuring multi-walled carbon nanotubes (MWCNTs), however, conform to an opposing trend. To reconcile these observations, we conduct additional MD simulations with MWCNTs that match those prepared in experiments; such simulations indicate that increased mass to surface area ratios in multi-walled systems explain the observed discrepancies. In reduction, our work substantiates the inverse relationship between protein adsorption capacity and surface curvature and further demonstrates the need for subtle consideration in experimental and simulation design.
蛋白质在碳基纳米材料(CBNs)上的吸附取决于脂肪族和芳香族残基与共轭CBN表面之间的疏水相互作用和π-π相互作用。因此,蛋白质吸附对CBN表面结构所施加的拓扑限制高度敏感;特别是,人们认为吸附容量会随着入射表面曲率的减小而增加。在这项工作中,我们将分子动力学(MD)模拟与荧光光谱实验相结合,以详细表征模型蛋白牛血清白蛋白(BSA)的这种曲率依赖性。通过研究BSA在半径不断增加(局部曲率递减)的碳纳米管和平面石墨烯片上的吸附情况,我们证实了在更平坦的表面上吸附容量确实会增强。然而,以多壁碳纳米管(MWCNTs)为对象的简单荧光实验却呈现出相反的趋势。为了协调这些观察结果,我们对与实验中制备的MWCNTs相匹配的MWCNTs进行了额外的MD模拟;此类模拟表明,多壁系统中质量与表面积比的增加解释了所观察到的差异。简而言之,我们的工作证实了蛋白质吸附容量与表面曲率之间的反比关系,并进一步证明了在实验和模拟设计中进行细致考虑的必要性。