Malinverni Duccio, Marsili Simone, Barducci Alessandro, De Los Rios Paolo
Laboratoire de Biophysique Statistique, École Polytechnique Fédérale de Lausanne, Faculté de Sciences de Base, Lausanne, Switzerland.
Structural Computational Biology Group, Spanish National Cancer Research Centre (CNIO), Madrid, Spain.
PLoS Comput Biol. 2015 Jun 5;11(6):e1004262. doi: 10.1371/journal.pcbi.1004262. eCollection 2015 Jun.
Hsp70s are a class of ubiquitous and highly conserved molecular chaperones playing a central role in the regulation of proteostasis in the cell. Hsp70s assist a myriad of cellular processes by binding unfolded or misfolded substrates during a complex biochemical cycle involving large-scale structural rearrangements. Here we show that an analysis of coevolution at the residue level fully captures the characteristic large-scale conformational transitions of this protein family, and predicts an evolutionary conserved-and thus functional-homo-dimeric arrangement. Furthermore, we highlight that the features encoding the Hsp70 dimer are more conserved in bacterial than in eukaryotic sequences, suggesting that the known Hsp70/Hsp110 hetero-dimer is a eukaryotic specialization built on a pre-existing template.
热休克蛋白70(Hsp70s)是一类普遍存在且高度保守的分子伴侣,在细胞内蛋白质稳态的调节中发挥着核心作用。在一个涉及大规模结构重排的复杂生化循环中,Hsp70s通过结合未折叠或错误折叠的底物来协助众多细胞过程。在这里,我们表明,在残基水平上的共进化分析能够完全捕捉到这个蛋白质家族特有的大规模构象转变,并预测出一种进化保守的——因此也是功能性的——同型二聚体排列。此外,我们强调,编码Hsp70二聚体的特征在细菌序列中比在真核生物序列中更为保守,这表明已知的Hsp70/Hsp110异源二聚体是基于一个预先存在的模板形成的真核生物特化结构。