海洋采样日联盟

The ocean sampling day consortium.

作者信息

Kopf Anna, Bicak Mesude, Kottmann Renzo, Schnetzer Julia, Kostadinov Ivaylo, Lehmann Katja, Fernandez-Guerra Antonio, Jeanthon Christian, Rahav Eyal, Ullrich Matthias, Wichels Antje, Gerdts Gunnar, Polymenakou Paraskevi, Kotoulas Giorgos, Siam Rania, Abdallah Rehab Z, Sonnenschein Eva C, Cariou Thierry, O'Gara Fergal, Jackson Stephen, Orlic Sandi, Steinke Michael, Busch Julia, Duarte Bernardo, Caçador Isabel, Canning-Clode João, Bobrova Oleksandra, Marteinsson Viggo, Reynisson Eyjolfur, Loureiro Clara Magalhães, Luna Gian Marco, Quero Grazia Marina, Löscher Carolin R, Kremp Anke, DeLorenzo Marie E, Øvreås Lise, Tolman Jennifer, LaRoche Julie, Penna Antonella, Frischer Marc, Davis Timothy, Katherine Barker, Meyer Christopher P, Ramos Sandra, Magalhães Catarina, Jude-Lemeilleur Florence, Aguirre-Macedo Ma Leopoldina, Wang Shiao, Poulton Nicole, Jones Scott, Collin Rachel, Fuhrman Jed A, Conan Pascal, Alonso Cecilia, Stambler Noga, Goodwin Kelly, Yakimov Michael M, Baltar Federico, Bodrossy Levente, Van De Kamp Jodie, Frampton Dion Mf, Ostrowski Martin, Van Ruth Paul, Malthouse Paul, Claus Simon, Deneudt Klaas, Mortelmans Jonas, Pitois Sophie, Wallom David, Salter Ian, Costa Rodrigo, Schroeder Declan C, Kandil Mahrous M, Amaral Valentina, Biancalana Florencia, Santana Rafael, Pedrotti Maria Luiza, Yoshida Takashi, Ogata Hiroyuki, Ingleton Tim, Munnik Kate, Rodriguez-Ezpeleta Naiara, Berteaux-Lecellier Veronique, Wecker Patricia, Cancio Ibon, Vaulot Daniel, Bienhold Christina, Ghazal Hassan, Chaouni Bouchra, Essayeh Soumya, Ettamimi Sara, Zaid El Houcine, Boukhatem Noureddine, Bouali Abderrahim, Chahboune Rajaa, Barrijal Said, Timinouni Mohammed, El Otmani Fatima, Bennani Mohamed, Mea Marianna, Todorova Nadezhda, Karamfilov Ventzislav, Ten Hoopen Petra, Cochrane Guy, L'Haridon Stephane, Bizsel Kemal Can, Vezzi Alessandro, Lauro Federico M, Martin Patrick, Jensen Rachelle M, Hinks Jamie, Gebbels Susan, Rosselli Riccardo, De Pascale Fabio, Schiavon Riccardo, Dos Santos Antonina, Villar Emilie, Pesant Stéphane, Cataletto Bruno, Malfatti Francesca, Edirisinghe Ranjith, Silveira Jorge A Herrera, Barbier Michele, Turk Valentina, Tinta Tinkara, Fuller Wayne J, Salihoglu Ilkay, Serakinci Nedime, Ergoren Mahmut Cerkez, Bresnan Eileen, Iriberri Juan, Nyhus Paul Anders Fronth, Bente Edvardsen, Karlsen Hans Erik, Golyshin Peter N, Gasol Josep M, Moncheva Snejana, Dzhembekova Nina, Johnson Zackary, Sinigalliano Christopher David, Gidley Maribeth Louise, Zingone Adriana, Danovaro Roberto, Tsiamis George, Clark Melody S, Costa Ana Cristina, El Bour Monia, Martins Ana M, Collins R Eric, Ducluzeau Anne-Lise, Martinez Jonathan, Costello Mark J, Amaral-Zettler Linda A, Gilbert Jack A, Davies Neil, Field Dawn, Glöckner Frank Oliver

机构信息

Max Planck Institute for Marine Microbiology, Celsiusstrasse 1, D-28359 Bremen, Germany ; Jacobs University Bremen gGmbH, Campus Ring 1, D-28759 Bremen, Germany.

University of Oxford, 7 Keble Road, OX1 3QG Oxford, Oxfordshire UK.

出版信息

Gigascience. 2015 Jun 19;4:27. doi: 10.1186/s13742-015-0066-5. eCollection 2015.

DOI:10.1186/s13742-015-0066-5

PMID:26097697

原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4473829/

Abstract

Ocean Sampling Day was initiated by the EU-funded Micro B3 (Marine Microbial Biodiversity, Bioinformatics, Biotechnology) project to obtain a snapshot of the marine microbial biodiversity and function of the world's oceans. It is a simultaneous global mega-sequencing campaign aiming to generate the largest standardized microbial data set in a single day. This will be achievable only through the coordinated efforts of an Ocean Sampling Day Consortium, supportive partnerships and networks between sites. This commentary outlines the establishment, function and aims of the Consortium and describes our vision for a sustainable study of marine microbial communities and their embedded functional traits.

摘要

“海洋采样日”由欧盟资助的“微生物B3”（海洋微生物多样性、生物信息学、生物技术）项目发起，旨在获取全球海洋微生物多样性和功能的快照。这是一项同步进行的全球大规模测序活动，目标是在一天内生成最大规模的标准化微生物数据集。只有通过“海洋采样日联盟”的协同努力、各站点之间的支持性伙伴关系和网络，这一目标才能实现。本评论概述了联盟的成立、功能和目标，并描述了我们对海洋微生物群落及其内在功能特征进行可持续研究的愿景。