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从头组装和表征水稻二化螟中枢神经系统转录组揭示其神经递质信号系统

De novo assembly and characterization of central nervous system transcriptome reveals neurotransmitter signaling systems in the rice striped stem borer, Chilo suppressalis.

作者信息

Xu Gang, Wu Shun-Fan, Wu Ya-Su, Gu Gui-Xiang, Fang Qi, Ye Gong-Yin

机构信息

State Key Laboratory of Rice Biology & Key Laboratory of Agricultural Entomology of Ministry of Agriculture, Institute of Insect Sciences, Zhejiang University, Hangzhou, 310058, China.

State & Local Joint Engineering Research Center of Green Pesticide Invention and Application, College of Plant Protection, Nanjing Agricultural University, Nanjing, 210095, China.

出版信息

BMC Genomics. 2015 Jul 15;16(1):525. doi: 10.1186/s12864-015-1742-7.

Abstract

BACKGROUND

Neurotransmitter signaling systems play crucial roles in multiple physiological and behavioral processes in insects. Genome wide analyses of de novo transcriptome sequencing and gene specific expression profiling provide rich resources for studying neurotransmitter signaling pathways. The rice striped stem borer, Chilo suppressalis is a destructive rice pest in China and other Asian countries. The characterization of genes involved in neurotransmitter biosynthesis and transport could identify potential targets for disruption of the neurochemical communication and for crop protection.

RESULTS

Here we report de novo sequencing of the C. suppressalis central nervous system transcriptome, identification and expression profiles of genes putatively involved in neurotransmitter biosynthesis, packaging, and recycling/degradation. A total of 54,411 unigenes were obtained from the transcriptome analysis. Among these unigenes, we have identified 32 unigenes (31 are full length genes), which encode 21 enzymes and 11 transporters putatively associated with biogenic aminergic signaling, acetylcholinergic signaling, glutamatergic signaling and GABAergic signaling. RT-PCR and qRT-PCR results indicated that 12 enzymes were highly expressed in the central nervous system and all the transporters were expressed at significantly high levels in the central nervous system. In addition, the transcript abundances of enzymes and transporters in the central nervous system were validated by qRT-PCR. The high expression levels of these genes suggest their important roles in the central nervous system.

CONCLUSIONS

Our study identified genes potentially involved in neurotransmitter biosynthesis and transport in C. suppressalis and these genes could serve as targets to interfere with neurotransmitter production. This study presents an opportunity for the development of specific and environmentally safe insecticides for pest control.

摘要

背景

神经递质信号系统在昆虫的多种生理和行为过程中发挥着关键作用。从头转录组测序和基因特异性表达谱的全基因组分析为研究神经递质信号通路提供了丰富的资源。二化螟是中国和其他亚洲国家一种具有破坏性的水稻害虫。对参与神经递质生物合成和转运的基因进行表征,有助于确定破坏神经化学通讯及作物保护的潜在靶点。

结果

在此,我们报告了二化螟中枢神经系统转录组的从头测序,以及可能参与神经递质生物合成、包装和回收/降解的基因的鉴定和表达谱。通过转录组分析共获得54,411个单基因。在这些单基因中,我们鉴定出32个单基因(31个为全长基因),它们编码21种酶和11种转运蛋白,这些蛋白可能与生物胺能信号、乙酰胆碱能信号、谷氨酸能信号和γ-氨基丁酸能信号相关。RT-PCR和qRT-PCR结果表明,12种酶在中枢神经系统中高表达,所有转运蛋白在中枢神经系统中的表达水平均显著较高。此外,通过qRT-PCR验证了中枢神经系统中酶和转运蛋白的转录丰度。这些基因的高表达水平表明它们在中枢神经系统中发挥着重要作用。

结论

我们的研究鉴定了二化螟中可能参与神经递质生物合成和转运的基因,这些基因可作为干扰神经递质产生的靶点。本研究为开发用于害虫防治的特异性和环境安全型杀虫剂提供了契机。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ada5/4501067/617cbd292ffe/12864_2015_1742_Fig1_HTML.jpg

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