Chumová Zuzana, Krejčíková Jana, Mandáková Terezie, Suda Jan, Trávníček Pavel
Department of Botany, Faculty of Science, Charles University in Prague, Prague, Czech Republic.
Central-European Institute of Technology, Masaryk University, Brno, Czech Republic.
PLoS One. 2015 Jul 24;10(7):e0133748. doi: 10.1371/journal.pone.0133748. eCollection 2015.
The genus Anthoxanthum (sweet vernal grass, Poaceae) represents a taxonomically intricate polyploid complex with large phenotypic variation and its evolutionary relationships still poorly resolved. In order to get insight into the geographic distribution of ploidy levels and assess the taxonomic value of genome size data, we determined C- and Cx-values in 628 plants representing all currently recognized European species collected from 197 populations in 29 European countries. The flow cytometric estimates were supplemented by conventional chromosome counts. In addition to diploids, we found two low (rare 3x and common 4x) and one high (~16x-18x) polyploid levels. Mean holoploid genome sizes ranged from 5.52 pg in diploid A. alpinum to 44.75 pg in highly polyploid A. amarum, while the size of monoploid genomes ranged from 2.75 pg in tetraploid A. alpinum to 9.19 pg in diploid A. gracile. In contrast to Central and Northern Europe, which harboured only limited cytological variation, a much more complex pattern of genome sizes was revealed in the Mediterranean, particularly in Corsica. Eight taxonomic groups that partly corresponded to traditionally recognized species were delimited based on genome size values and phenotypic variation. Whereas our data supported the merger of A. aristatum and A. ovatum, eastern Mediterranean populations traditionally referred to as diploid A. odoratum were shown to be cytologically distinct, and may represent a new taxon. Autopolyploid origin was suggested for 4x A. alpinum. In contrast, 4x A. odoratum seems to be an allopolyploid, based on the amounts of nuclear DNA. Intraspecific variation in genome size was observed in all recognized species, the most striking example being the A. aristatum/ovatum complex. Altogether, our study showed that genome size can be a useful taxonomic marker in Anthoxathum to not only guide taxonomic decisions but also help resolve evolutionary relationships in this challenging grass genus.
黄花茅属(早熟禾科香茅)是一个分类复杂的多倍体复合体,具有很大的表型变异,其进化关系仍未得到很好的解决。为了深入了解多倍体水平的地理分布并评估基因组大小数据的分类学价值,我们测定了从29个欧洲国家的197个种群中采集的628株代表所有目前公认的欧洲物种的植物的C值和Cx值。流式细胞术估计辅以传统的染色体计数。除了二倍体,我们还发现了两个低多倍体水平(罕见的三倍体和常见的四倍体)和一个高多倍体水平(约16倍体 - 18倍体)。单倍体基因组的平均大小范围从二倍体高山黄花茅的5.52 pg到高度多倍体苦味黄花茅的44.75 pg,而单倍体基因组的大小范围从四倍体高山黄花茅的2.75 pg到二倍体纤细黄花茅的9.19 pg。与中欧和北欧仅存在有限的细胞学变异不同,地中海地区,特别是科西嘉岛,揭示了一种更为复杂的基因组大小模式。基于基因组大小值和表型变异划定了八个分类群,这些分类群部分对应于传统上认可的物种。虽然我们的数据支持将具芒黄花茅和卵形黄花茅合并,但传统上称为二倍体香草黄花茅的东地中海种群在细胞学上是不同的,可能代表一个新的分类单元。推测四倍体高山黄花茅起源于同源多倍体。相比之下,基于核DNA的量,四倍体香草黄花茅似乎是异源多倍体。在所有公认的物种中都观察到了基因组大小的种内变异,最显著的例子是具芒黄花茅/卵形黄花茅复合体。总之,我们的研究表明,基因组大小可以成为黄花茅属中一个有用的分类学标记,不仅可以指导分类学决策,还可以帮助解决这个具有挑战性的禾本科属中的进化关系。