Bose Arindam, Pande Paritosh, Jasti Vijay P, Millsap Amy D, Hawkins Edward K, Rizzo Carmelo J, Basu Ashis K
Department of Chemistry, University of Connecticut, Storrs, CT 06269, USA.
Department of Chemistry, Vanderbilt University, Nashville, TN 37232, USA.
Nucleic Acids Res. 2015 Sep 30;43(17):8340-51. doi: 10.1093/nar/gkv750. Epub 2015 Jul 28.
The roles of translesion synthesis (TLS) DNA polymerases in bypassing the C8-2'-deoxyguanosine adduct (dG-C8-IQ) formed by 2-amino-3-methylimidazo[4,5-f]quinoline (IQ), a highly mutagenic and carcinogenic heterocyclic amine found in cooked meats, were investigated. Three plasmid vectors containing the dG-C8-IQ adduct at the G1-, G2- or G3-positions of the NarI site (5'-G1G2CG3CC-3') were replicated in HEK293T cells. Fifty percent of the progeny from the G3 construct were mutants, largely G→T, compared to 18% and 24% from the G1 and G2 constructs, respectively. Mutation frequency (MF) of dG-C8-IQ was reduced by 38-67% upon siRNA knockdown of pol κ, whereas it was increased by 10-24% in pol η knockdown cells. When pol κ and pol ζ were simultaneously knocked down, MF of the G1 and G3 constructs was reduced from 18% and 50%, respectively, to <3%, whereas it was reduced from 24% to <1% in the G2 construct. In vitro TLS using yeast pol ζ showed that it can extend G3*:A pair more efficiently than G3*:C pair, but it is inefficient at nucleotide incorporation opposite dG-C8-IQ. We conclude that pol κ and pol ζ cooperatively carry out the majority of the error-prone TLS of dG-C8-IQ, whereas pol η is involved primarily in its error-free bypass.
2-氨基-3-甲基咪唑[4,5-f]喹啉(IQ)是一种在熟肉中发现的具有高度致突变性和致癌性的杂环胺,可形成C8-2'-脱氧鸟苷加合物(dG-C8-IQ)。本文研究了跨损伤合成(TLS)DNA聚合酶在绕过该加合物过程中的作用。三种质粒载体在NarI位点(5'-G1G2CG3CC-3')的G1、G2或G3位置含有dG-C8-IQ加合物,并在HEK293T细胞中进行复制。G3构建体产生的子代中有50%是突变体,主要是G→T突变,而G1和G2构建体产生的突变体分别为18%和24%。在pol κ的siRNA敲低后,dG-C8-IQ的突变频率(MF)降低了38-67%,而在pol η敲低的细胞中,MF增加了10-24%。当pol κ和pol ζ同时被敲低时,G1和G3构建体的MF分别从18%和50%降至<3%,而G2构建体的MF从24%降至<1%。使用酵母pol ζ进行的体外TLS实验表明,它延伸G3*:A碱基对比延伸G3*:C碱基对更有效,但在dG-C8-IQ对面掺入核苷酸的效率较低。我们得出结论,pol κ和pol ζ协同进行dG-C8-IQ的大部分易错TLS,而pol η主要参与其无错绕过。