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ERC analysis: web-based inference of gene function via evolutionary rate covariation.
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Evolutionary rate covariation reveals shared functionality and coexpression of genes.
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Evolutionary rate covariation in meiotic proteins results from fluctuating evolutionary pressure in yeasts and mammals.
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Evolutionary genomics. Fruit fly blitz shows the power of comparative genomics.
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Comparative functional genomics of stress responses in yeasts.
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Comparative genomics of biotechnologically important yeasts.
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Evolutionary signatures amongst disease genes permit novel methods for gene prioritization and construction of informative gene-based networks.
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引用本文的文献

1
ERCnet: Phylogenomic Prediction of Interaction Networks in the Presence of Gene Duplication.
Mol Biol Evol. 2025 Apr 30;42(5). doi: 10.1093/molbev/msaf089.
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MAIA, Fc receptor-like 3, supersedes JUNO as IZUMO1 receptor during human fertilization.
Sci Adv. 2022 Sep 9;8(36):eabn0047. doi: 10.1126/sciadv.abn0047. Epub 2022 Sep 7.
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Mito-nuclear coevolution and phylogenetic artifacts: the case of bivalve mollusks.
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Novel ACE2 protein interactions relevant to COVID-19 predicted by evolutionary rate correlations.
PeerJ. 2021 Sep 15;9:e12159. doi: 10.7717/peerj.12159. eCollection 2021.
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Evolutionary rate covariation identifies SLC30A9 (ZnT9) as a mitochondrial zinc transporter.
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A screen identifies NKCC1 as a modifier of NGLY1 deficiency.
Elife. 2020 Dec 14;9:e57831. doi: 10.7554/eLife.57831.
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Evolutionary rate covariation analysis of E-cadherin identifies Raskol as a regulator of cell adhesion and actin dynamics in Drosophila.
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Genomic Signatures of Sexual Conflict.
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本文引用的文献

1
Evolutionary signatures amongst disease genes permit novel methods for gene prioritization and construction of informative gene-based networks.
PLoS Genet. 2015 Feb 13;11(2):e1004967. doi: 10.1371/journal.pgen.1004967. eCollection 2015 Feb.
3
FlyBase: introduction of the Drosophila melanogaster Release 6 reference genome assembly and large-scale migration of genome annotations.
Nucleic Acids Res. 2015 Jan;43(Database issue):D690-7. doi: 10.1093/nar/gku1099. Epub 2014 Nov 14.
5
The UCSC Genome Browser database: 2014 update.
Nucleic Acids Res. 2014 Jan;42(Database issue):D764-70. doi: 10.1093/nar/gkt1168. Epub 2013 Nov 21.
6
Evolutionary rate covariation in meiotic proteins results from fluctuating evolutionary pressure in yeasts and mammals.
Genetics. 2013 Feb;193(2):529-38. doi: 10.1534/genetics.112.145979. Epub 2012 Nov 26.
7
Evolutionary rate covariation reveals shared functionality and coexpression of genes.
Genome Res. 2012 Apr;22(4):714-20. doi: 10.1101/gr.132647.111. Epub 2012 Jan 27.
8
Saccharomyces Genome Database: the genomics resource of budding yeast.
Nucleic Acids Res. 2012 Jan;40(Database issue):D700-5. doi: 10.1093/nar/gkr1029. Epub 2011 Nov 21.
9
High-confidence prediction of global interactomes based on genome-wide coevolutionary networks.
Proc Natl Acad Sci U S A. 2008 Jan 22;105(3):934-9. doi: 10.1073/pnas.0709671105. Epub 2008 Jan 16.

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